Related papers: Moving breathers in a bent DNA-related model
DNA strand displacement is a key reaction in DNA homologous recombination and DNA mismatch repair and is also heavily utilized in DNA-based computation and locomotion. Despite its ubiquity in science and engineering, sequence-dependent…
The mobility of high-frequency discrete breathers in monatomic chains with nonlinear interatomic potentials of the nearest neighbours is considered. It was found that the odd (cubic and fifth) anharmonicity strongly affects the mobility of…
Collective coordinate and direct numerical integration methods are applied to the analysis of a one-dimensional DNA model. A modification of the coupling constant in an extended region is found to be less selective towards the breather it…
We derive a Hamiltonian version of the ${\cal PT}$-symmetric discrete nonlinear Schr\"{o}dinger equation that describes synchronized dynamics of coupled pendula driven by a periodic movement of their common strings. In the limit of weak…
We investigate the existence and stability of discrete breathers in a chain of masses connected by linear springs and subjected to vibro-impact on-site potentials. The latter are comprised of harmonic springs and rigid constraints limiting…
We report the experimental observation of discrete breathers in a one-dimensional diatomic granular crystal composed of compressed elastic beads that interact via Hertzian contact. We first characterize their effective linear spectrum both…
The existence of discrete breathers (DBs), or intrinsic localized modes (localized periodic oscillations of transzigzag) is shown. In the localization region periodic contraction-extension of valence C-C bonds occurs which is accompanied by…
Inspired by the experimental results of Cuevas et al. (Physical Review Letters 102, 224101 (2009)), we consider theoretically the behavior of a chain of planar rigid pendulums suspended in a uniform gravitational field and subjected to a…
Magnetic metamaterials composed of split-ring resonators or $U-$type elements may exhibit discreteness effects in THz and optical frequencies due to weak coupling. We consider a model one-dimensional metamaterial formed by a discrete array…
In the present work we revisit the existence, stability and dynamical properties of moving discrete breathers in $\beta$-FPU lattices. On the existence side, we propose a numerical procedure, based on a continuation along a sequence of…
The question whether a nonlinear localized mode (discrete soliton/breather) can be mobile in a lattice has a standard interpretation in terms of the Peierls-Nabarro (PN) potential barrier. For the most commonly studied cases, the PN barrier…
We explore breather propagation in the damped oscillatory chain with essentially nonlinear (non-linearizable) nearest-neighbour coupling. Combination of the damping and the substantially nonlinear coupling leads to rather unusual two-stage…
A simple model of a polymer is considered: a chain of (different) point masses, connected by harmonic springs, embedded in two dimensional space. In order to determine conditions for existence and stability of breather excitations, the…
We investigate the nonlinear dynamics of a damped Peyrard-Bishop DNA model taking into account long-range interactions with distance dependence |l|^-s on the elastic coupling constant between different DNA base pairs. Considering both…
We consider a previously experimentally realized discrete model that describes a mechanical metamaterial consisting of a chain of pairs of rigid units connected by flexible hinges. Upon analyzing the linear band structure of the model, we…
A couple of models are explained. Helicoidal PB model is studied in more details. It is shown that semi-discrete approximation yields to breather-type soliton moving along the chain. The model can explain local opening as a resonance mode.…
The dynamics of static and travelling breathers in two-species Bose-Einstein condensates in a one-dimensional optical lattice is modelled within the tight-binding approximation. Two coupled discrete nonlinear Schr\"odinger equations…
We describe, for the first time, the full 2D scattering of long-lived breathers in a model hexagonal lattice of atoms. The chosen system, representing an idealized model of mica, combines a Lennard-Jones interatomic potential with an…
We analyze the properties of breathers (time periodic spatially localized solutions) on chains in the presence of algebraically decaying interactions $1/r^s$. We find that the spatial decay of a breather shows a crossover from exponential…
A vacancy defect is described by a Frenkel--Kontorova model with a discommensuration. This vacancy can migrate when interacts with a moving breather. We establish that the width of the interaction potential must be larger than a threshold…