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All possible phenotypes are not equally accessible to evolving populations. In fact, only phenotypes of large size, i.e. those resulting from many different genotypes, are found in populations of sequences, presumably because they are…

Populations and Evolution · Quantitative Biology 2023-08-16 Pablo Catalán , Juan Antonio García-Martín , Jacobo Aguirre , José A. Cuesta , Susanna Manrubia

Resource are often not uniformly distributed within a population. Spatial variations of concentration of a resource, change the fitness of competing strategies locally. The notion of fitness varying with respect to both genotype and…

Populations and Evolution · Quantitative Biology 2022-04-08 Hossein Nemati , Mohammad Reza Ejtehadi , Kamran Kaveh

We derive an expression for the variation between parallel trajectories in phenotypic evolution, extending the well known result that predicts the mean evolutionary path in adaptive dynamics or quantitative genetics. We show how this…

Populations and Evolution · Quantitative Biology 2010-04-27 Carl Boettiger , Jonathan Dushoff , Joshua S. Weitz

Fitness consequence of dispersal depends on property of the entire landscape, which patches are available and what are the cost of moving. These are information that are not available locally when an organism make the decision to disperse.…

Populations and Evolution · Quantitative Biology 2026-01-08 Wayne Liang , Rufus Johnstone

This work presents a population genetic model of evolution, which includes haploid selection, mutation, recombination, and drift. The mutation-selection equilibrium can be expressed exactly in closed form for arbitrary fitness functions…

Populations and Evolution · Quantitative Biology 2023-02-28 Jenny M. Poulton , Lee Altenberg , Chris Watkins

An adult human body is made up of some 30 to 40 trillion cells, all of which stem from a single fertilized egg cell. The process by which the right cells appear to arrive in their right numbers at the right time at the right place --…

Subcellular Processes · Quantitative Biology 2024-12-20 Sean T. Vittadello , Léo Diaz , Yujing Liu , Adriana Zanca , Michael P. H. Stumpf

We present a novel approach to performing fitness approximation in genetic algorithms (GAs) using machine-learning (ML) models, through dynamic adaptation to the evolutionary state. Maintaining a dataset of sampled individuals along with…

Neural and Evolutionary Computing · Computer Science 2024-05-22 Itai Tzruia , Tomer Halperin , Moshe Sipper , Achiya Elyasaf

Essential to each other, growth and exploration are jointly observed in populations, be it alive such as animals and cells or inanimate such as goods and money. But their ability to move, crucial to cope with uncertainty and optimize…

Statistical Mechanics · Physics 2020-10-06 Thomas Gueudré , David Martin

The interaction networks of biological systems are known to take on several non-random structural properties, some of which are believed to positively influence system robustness. Researchers are only starting to understand how these…

Neural and Evolutionary Computing · Computer Science 2011-02-08 James M. Whitacre , Ruhul A. Sarker , Q. Tuan Pham

For two genotypes that have the same mean number of offspring but differ in the variance in offspring number, natural selection will favor the genotype with lower variance. The concept of fitness becomes cloudy under these conditions…

Populations and Evolution · Quantitative Biology 2007-05-23 Max Shpak , Stephen Proulx

Modern ecology has re-emphasized the need for a quantitative understanding of the original 'survival of the fittest theme' based on analyzis of the intricate trade-offs between competing evolutionary strategies that characterize the…

Populations and Evolution · Quantitative Biology 2015-06-16 Jacopo Grilli , Samir Suweis , Amos Maritan

Unraveling patterns of animals' movements is important for understanding the fundamental basics of biogeography, tracking range shifts resulting from climate change, predicting and preventing biological invansions. Many researchers have…

Populations and Evolution · Quantitative Biology 2020-04-20 Nikolay Markov , Evgeny Ivanko

Models in evolutionary game theory traditionally assume symmetric interactions in homogeneous environments. Here, we consider populations evolving in a heterogeneous environment, which consists of patches of different qualities that are…

Populations and Evolution · Quantitative Biology 2018-12-11 Christoph Hauert , Camille Saade , Alex McAvoy

The time evolution of a simple model for crossover is discussed. A variant of this model with an improved exploration behavior in phase space is derived as a subset of standard one- and multi-point crossover operations. This model is solved…

adap-org · Physics 2015-06-30 Stefan Bornholdt , Heinz Georg Schuster

Effective locomotion in nature happens by transitioning across multiple modes (e.g., walk, run, climb). Despite this, far more mechanistic understanding of terrestrial locomotion has been on how to generate and stabilize around…

Biological Physics · Physics 2025-09-22 Ratan Othayoth , George Thoms , Chen Li

Competitions can occur on an absolute scale, to be faster or more efficient, or they can occur on a relative scale, to "beat" one's competitor in a zero-sum game. Ecological models have focused on absolute competitions, in which optima…

Populations and Evolution · Quantitative Biology 2015-10-02 Joanna Masel

Competition between individuals drives the evolution of whole species. Although the fittest individuals survive the longest and produce the most offspring, in some circumstances the resulting species may not be optimally fit. Here, using…

Populations and Evolution · Quantitative Biology 2015-09-24 Tim Rogers , Alan J. McKane

It has recently been noted that the relative prevalence of the various kinds of epistasis varies along an adaptive walk. This has been explained as a result of mean regression in NK model fitness landscapes. Here we show that this…

Populations and Evolution · Quantitative Biology 2015-06-16 Devin Greene , Kristina Crona

A simple spatial computer simulation model was recently introduced to study the evolution of the linguistic diversity. The model considers processes of selective geographic colonization, linguistic anomalous diffusion and mutation. In the…

Physics and Society · Physics 2009-11-11 Viviane M. de Oliveira , Paulo R. A. Campos , Marcelo A. F. Gomes , Ing Ren Tsang

We consider a fixed size population that undergoes an evolutionary adaptation in the weak mutuation rate limit, which we model as a biased Langevin process in the genotype space. We show analytically and numerically that, if the fitness…

Populations and Evolution · Quantitative Biology 2014-02-04 Jakub Otwinowski , Sorin Tanase-Nicola , Ilya Nemenman