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Nature features a plethora of extraordinary photonic architectures that have been optimized through natural evolution. While numerical optimization is increasingly and successfully used in photonics, it has yet to replicate any of these…

Recently, it has been proven that evolutionary algorithms produce good results for a wide range of combinatorial optimization problems. Some of the considered problems are tackled by evolutionary algorithms that use a representation which…

Neural and Evolutionary Computing · Computer Science 2013-01-18 Benjamin Doerr , Anton Eremeev , Frank Neumann , Madeleine Theile , Christian Thyssen

Genetic fitness optimization using small populations or small population updates across generations generally suffers from randomly diverging evolutions. We propose a notion of highly probable fitness optimization through feasible…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Paul Vitanyi

The advantages of evolutionary algorithms with respect to traditional methods have been greatly discussed in the literature. While particle swarm optimizers share such advantages, they outperform evolutionary algorithms in that they require…

Neural and Evolutionary Computing · Computer Science 2021-01-28 Johann Sienz , Mauro S. Innocente

We present a simple yet effective method for structure prediction of two-dimensional structures. The method is based on a combination of neural networks and evolutionary techniques. It allows finding pristine 2D structures as well as…

Materials Science · Physics 2020-05-15 K. Zberecki

Traditionally evolution is seen as a process where from a pool of possible variations of a population (e.g. biological species or industrial goods) a few variations get selected which survive and proliferate, whereas the others vanish.…

Populations and Evolution · Quantitative Biology 2008-09-25 Rudolf Hanel , Stefan Thurner

The classical Geiringer theorem addresses the limiting frequency of occurrence of various alleles after repeated application of crossover. It has been adopted to the setting of evolutionary algorithms and, a lot more recently, reinforcement…

Neural and Evolutionary Computing · Computer Science 2013-11-26 Boris Mitavskiy , Elio Tuci , Chris Cannings , Chris Cannings , Jonathan Rowe , Jun He

Biological evolution depends on the passing down to subsequent generations of genetic information encoding beneficial traits, and on the removal of unfit individuals by a selection mechanism. However, selection acts on phenotypes, and is…

Populations and Evolution · Quantitative Biology 2026-05-01 Bastien Mallein , Francesco Paparella , Emmanuel Schertzer , Zsófia Talyigás

Evolutionary algorithms (EAs) form a popular optimisation paradigm inspired by natural evolution. In recent years the field of evolutionary computation has developed a rigorous analytical theory to analyse their runtime on many illustrative…

Neural and Evolutionary Computing · Computer Science 2015-10-02 Tiago Paixão , Jorge Pérez Heredia , Dirk Sudholt , Barbora Trubenová

This paper studies the applicability of evolutionary algorithms, particularly, the evolution strategies family in order to estimate a degradation parameter in the shear design of reinforced concrete members. This problem represents a great…

Neural and Evolutionary Computing · Computer Science 2014-06-24 José Alberto García Gutiérrez , Alejandro Mateo Hernández Díaz

Many improvements to programming have come from shortening feedback loops, for example with Integrated Development Environments, Unit Testing, Live Programming, and Distributed Version Control. A barrier to feedback that deserves greater…

Programming Languages · Computer Science 2024-12-10 Jonathan Edwards , Tomas Petricek , Tijs van der Storm , Geoffrey Litt

Consider a mathematical model of evolutionary adaptation of fitness landscape and mutation matrix as a reaction to population changes. As a basis, we use an open quasispecies model, which is modified to include explicit death flow. We…

Populations and Evolution · Quantitative Biology 2020-11-25 Igor Samokhin , Tatiana Yakushkina , Alexander S. Bratus

The development of a large non-coding fraction in eukaryotic DNA and the phenomenon of the code-bloat in the field of evolutionary computations show a striking similarity. This seems to suggest that (in the presence of mechanisms of code…

Quantitative Methods · Quantitative Biology 2009-11-13 Giovanni Feverati , Fabio Musso

Biological evolution continuously refines the design of species, resulting in highly optimised organisms over hundreds of millennia. Intuitively, we expect that random changes-evolution's primary mechanism-are more likely to be harmful than…

Populations and Evolution · Quantitative Biology 2025-01-24 Alessandro Fontana , Marios Kyriazis

Stronger selection implies faster evolution---that is, the greater the force, the faster the change. This apparently self-evident proposition, however, is derived under the assumption that genetic variation within a population is primarily…

Populations and Evolution · Quantitative Biology 2017-08-18 Masahiko Ueda , Nobuto Takeuchi , Kunihiko Kaneko

This paper applies Algorithmic Information Theory to simple examples of replication processes to illustrate how replicating structures can generate and maintain order in a non equilibrium system. Variation in replicating structures enhances…

Adaptation and Self-Organizing Systems · Physics 2008-11-12 Sean D Devine

The evolution of cooperation often depends upon population structure, yet nearly all models of cooperation implicitly assume that this structure remains static. This is a simplifying assumption, because most organisms possess genetic traits…

Populations and Evolution · Quantitative Biology 2012-08-03 Simon T. Powers , Alexandra S. Penn , Richard A. Watson

In this paper we develop and test algorithmic techniques to estimate genotypes fitnesses by analysis of observed daily frequency data monitoring the long-term evolution of bacterial populations. In particular, we develop a non-linear least…

Populations and Evolution · Quantitative Biology 2020-10-05 Sergey S. Sarkisov , Ilya Timofeyev , Robert Azencott

Information can evolve as a physical consequence of non-equilibrium dynamics, even in the absence of genes, replication, or predefined fitness functions. We present Stability-Driven Assembly (SDA), a framework in which stochastic assembly…

Populations and Evolution · Quantitative Biology 2026-05-11 Dan Adler

We present convincing empirical evidence for an effective and general strategy for building accurate small models. Such models are attractive for interpretability and also find use in resource-constrained environments. The strategy is to…

Machine Learning · Computer Science 2024-04-30 Abhishek Ghose