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Increasing the infection risk early in an epidemic is individually and socially optimal under some parameter values. The reason is that the early patients recover or die before the peak of the epidemic, which flattens the peak. This…

Populations and Evolution · Quantitative Biology 2020-04-28 Sander Heinsalu

Traditional biomedical approaches treat diseases in isolation, but the importance of synergistic disease interactions is now recognized. As a first step we present and analyze a simple coinfection model for two diseases affecting…

Dynamical Systems · Mathematics 2015-04-21 Marcos Marvá , Ezio Venturino , Rafael Bravo de la Parra

Dynamic models have been successfully used in producing estimates of HIV epidemics at the national level due to their epidemiological nature and their ability to estimate prevalence, incidence, and mortality rates simultaneously. Recently,…

Methodology · Statistics 2024-01-11 Le Bao , Xiaoyue Niu , Tim Brown , Jeffrey W. Imai-Eaton

We study SIS epidemic spreading processes unfolding on a recent generalisation of the activity-driven modelling framework. In this model of time-varying networks each node is described by two variables: activity and attractiveness. The…

Physics and Society · Physics 2017-11-01 Iacopo Pozzana , Kaiyuan Sun , Nicola Perra

Budding from the plasma membrane of the host cell is an indispensable step in the life cycle of the Human Immunodeficiency Virus (HIV), which belongs to a large family of enveloped RNA viruses, retroviruses. Unlike regular enveloped…

Subcellular Processes · Quantitative Biology 2013-05-29 Rui Zhang , Toan T. Nguyen

We model the immune surveillance of a pathogen which passes through $n$ immunologically distinct stages. The biological parameters of this system induce a partial order on the stages, and this, in turn, determines which stages will be…

Populations and Evolution · Quantitative Biology 2010-05-04 Edgar Delgado-Eckert , Michael Shapiro

The SIR model is the cornerstone model for mathematical epidemiology, explaining key epidemic features such as the second-order transition between disease-free and epidemic states, the initial exponential growth of outbreaks or the…

Populations and Evolution · Quantitative Biology 2026-03-20 Santiago Lamata-Otín , Alex Arenas , Jesús Gómez-Gardeñes , David Soriano-Paños

Methods are lacking to handle the problem of survival analysis in the presence of an interval-censored covariate, specifically the case in which the conditional hazard of the primary event of interest depends on the occurrence of a…

A ternary reaction-diffusion model for early HIV infection dynamics, incorporating logistic growth of target cells, is introduced. According to in vitro and in vivo studies, random movement of target cells, infected cells, and virions and a…

Populations and Evolution · Quantitative Biology 2024-10-21 Florinda Capone , Roberta De Luca , Vincenzo Luongo

Individuals change their behavior during an epidemic in response to whether they and/or those they interact with are healthy or sick. Healthy individuals are concerned about contracting a disease from their sick contacts and may utilize…

Social and Information Networks · Computer Science 2016-04-19 Ceyhun Eksin , Jeff S. Shamma , Joshua S. Weitz

Our chances to halt epidemic outbreaks rely on how accurately we represent the population structure underlying the disease spread. When analyzing global epidemics this force us to consider metapopulation models taking into account intra-…

Populations and Evolution · Quantitative Biology 2007-12-10 Alexei Vazquez

We consider a Human Immunodeficiency Virus (HIV) model with a logistic growth term and continue the analysis of the previous article [6]. We now take the viral diffusion in a two-dimensional environment. The model consists of two ODEs for…

Analysis of PDEs · Mathematics 2012-11-02 Claude-Michel Brauner , Xinyue Fan , Luca Lorenzi

Infectious diseases spread through human networks. Susceptible-Infected-Removed (SIR) model is one of the epidemic models to describe infection dynamics on a complex network connecting individuals. In the metapopulation SIR model, each node…

Physics and Society · Physics 2015-08-27 Kanako Mizuno , Kazue Kudo

A major contribution to the onset and development of autoimmune disease is known to come from infections. An important practical problem is identifying the precise mechanism by which the breakdown of immune tolerance as a result of immune…

Quantitative Methods · Quantitative Biology 2018-05-21 F. Fatehi Chenar , Y. N. Kyrychko , K. B. Blyuss

Master equations provide researchers with the ability to track the distribution over possible states of a system. From these equations, we can summarize the temporal dynamics through a method of moments. These distributions and their…

Populations and Evolution · Quantitative Biology 2024-08-13 Mariah C. Boudreau , Jamie A. Cohen , Laurent Hébert-Dufresne

In people infected with HIV the RNA viral load is a good predictor of the rate of loss of CD4 cells at a population level but there is still great variability in the rate of decline of CD4 cells among individuals. Here we show that the…

Cell Behavior · Quantitative Biology 2009-08-12 Brian G. Williams , Eline L. Korenromp , Eleanor Gouws , Christopher Dye

Pre-exposure prophylaxis (PrEP) consists in the use of an antiretroviral medication to prevent the acquisition of HIV infection by uninfected individuals and has recently demonstrated to be highly efficacious for HIV prevention. We propose…

Optimization and Control · Mathematics 2017-10-12 Cristiana J. Silva , Delfim F. M. Torres

We consider the standard three-component differential equation model for the growth of an HIV virion population in an infected host in the absence of drug therapy. The dynamical properties of the model are determined by the set of values of…

Populations and Evolution · Quantitative Biology 2011-07-19 Henry C Tuckwell , Patrick D Shipman

Mathematical modelling of the spread of epidemics has been an interesting challenge in the field of epidemiology. The SIR Model proposed by Kermack and McKendrick in 1927 is a prototypical model of epidemiology. However, it has its…

Populations and Evolution · Quantitative Biology 2021-04-13 Agniva Datta , Muktish Acharyya

Reports from the Health Department in the Philippines show that cases of Human Immunodeficiency Virus (HIV) are increasing despite management and control efforts by the government. Worldwide, the Philippines has one of the fastest growing…

Applications · Statistics 2019-11-14 Analaine May A. Tatoy , Roel F. Ceballos
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