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Related papers: HIV time hierarchy: Winning the war while, loosing…

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In this paper we consider the evolution of the HIV infection under a highly effective treatment based on a combination of RTI and/or PI drugs. This is usually modelled with a set of ODEs where the drug efficacy is a constant. In this paper…

Populations and Evolution · Quantitative Biology 2007-05-23 G. Della Rocca , M. Sammartino , L. Seta

Human immunodeficiency virus (HIV-1 or simply HIV) induces a persistent infection, which in the absence of treatment leads to AIDS and death in almost all infected individuals. HIV infection elicits a vigorous immune response starting about…

Populations and Evolution · Quantitative Biology 2015-06-05 Vitaly V. Ganusov , Richard A. Neher , Alan S. Perelson

In the standard Susceptible-Infected-Removed (SIR) and Susceptible-Exposed-Infected-Removed (SEIR) models, the peak of infected individuals coincides with the in ection point of removed individuals. Nevertheless, a survey based on the data…

Quantitative Methods · Quantitative Biology 2019-09-26 Ayse Peker Dobie , Ali Demirci , Ayse Humeyra Bilge , Semra Ahmetolan

The development of potent drugs for the control of viraemia in people living with HIV means that infected people may live a normal, healthy life and offers the prospect of eliminating HIV transmission in the short term and HIV infection in…

Quantitative Methods · Quantitative Biology 2013-08-08 Brian G Williams

Objective: The reservoir of human immunodeficiency virus (HIV) latently infected cells is the major obstacle for eradication of acquired immunodeficiency syndrome (AIDS). Due to the noisy environment and multiple influencing factors in the…

Biological Physics · Physics 2024-11-06 Ruiqi Xiong , Yang Su , Ping Ao

In early HIV infection, the virus population escapes from multiple CD8+ cell responses. The later an escape mutation emerges, the slower it outgrows its competition, i. e. the escape rate is lower. This pattern could indicate that the…

Populations and Evolution · Quantitative Biology 2014-09-30 Victor Garcia , Roland Regoes

As the global HIV pandemic enters its fourth decade, increasing numbers of surveillance sites have been established which allows countries to look into the epidemics at a finer scale, e.g. at sub-national level. However, the epidemic models…

Applications · Statistics 2014-11-18 Le Bao , Mary Mahy , Xiaoyue Niu , Tim Brown , Peter Ghys

Recent clinical studies have shown that HIV disease pathogenesis can depend strongly on many factors at the time of transmission, including the strength of the initial viral load and the local availability of CD4+ T-cells. In this article,…

Populations and Evolution · Quantitative Biology 2019-10-15 Stephen Pankavich , Nathan Neri , Deborah Shutt

Oxidative stress, a reaction caused by the imbalance between the reactive oxygen species of human organism and its ability to detoxify reactive intermediates and to repair the resulting damage plays an important role in HIV-infections. On…

Populations and Evolution · Quantitative Biology 2018-08-08 Shaoli Wang , Fei Xu , Xinyu Song

We study the early stages of viral infection, and the distribution of times to obtain a persistent infection. The virus population proliferates by entering and reproducing inside a target cell until a sufficient number of new virus…

Populations and Evolution · Quantitative Biology 2019-07-11 Carmel Sagi , Michael Assaf

HIV-1 can disseminate between susceptible cells by two mechanisms: cell-free infection following fluid-phase diffusion of virions and by highly-efficient direct cell-to-cell transmission at immune cell contacts. The contribution of this…

Populations and Evolution · Quantitative Biology 2024-01-02 Changwang Zhang , Shi Zhou , Elisabetta Groppelli , Pierre Pellegrino , Ian Williams , Persephone Borrow , Benjamin M. Chain , Clare Jolly

Sexual partnerships that overlap in time (concurrent relationships) may play a significant role in the HIV epidemic, but the precise effect is unclear. We derive edge-based compartmental models of disease spread in idealized dynamic…

Populations and Evolution · Quantitative Biology 2018-02-07 Joel C. Miller , Anja C. Slim

We have developed a mathematical model for in-host virus dynamics that includes spatial chemotaxis and diffusion across a two dimensional surface representing the vaginal or rectal epithelium at primary HIV infection. A linear stability…

Quantitative Methods · Quantitative Biology 2016-03-07 Ognjen Stancevic , Christopher Angstmann , John M. Murray , Bruce I. Henry

The concentration of CD4 T-lymphocytes (CD4 count), in a person's plasma is widely used to decide when to start HIV-positive people on anti-retroviral therapy (ART) and to predict the impact of ART on the future course of HIV and…

Quantitative Methods · Quantitative Biology 2013-01-08 Brian Williams , Eleanor Gouws

HIV is a deadly virus transmitted either through having of unprotected sex, mother to child transmission, sharing of unsterilized objects that is capable of making cut or wounds on the body, through blood or bodily fluid transmission. AIDS…

Populations and Evolution · Quantitative Biology 2016-09-19 M. O. Oladejo , Ali Onuche John

When the body is infected, it mounts an acute inflammatory response to rid itself of the pathogens and restore health. Uncontrolled acute inflammation due to infection is defined clinically as Sepsis and can culminate in organ failure and…

Tissues and Organs · Quantitative Biology 2007-05-23 Rukmini Kumar , Gilles Clermont , Yoram Vodovotz , Carson Chow

We consider a time-delayed HIV/AIDS epidemic model with education dissemination and study the asymptotic dynamics of solutions as well as the asymptotic behavior of the endemic equilibrium with respect to the amount of information…

Dynamical Systems · Mathematics 2021-08-10 Dawit Denu , Sedar Ngoma , Rachidi B. Salako

A dynamic model of non-lineal time-dependent ordinary differential equations (ODE) has been applied to the interactions of a HIV infection with the immune system cells. This model has been simplified into two compartments: lymph node and…

Cell Behavior · Quantitative Biology 2020-08-07 Miguel Ramos Pascual

Epidemics generally spread through a succession of waves that reflect factors on multiple timescales. On short timescales, super-spreading events lead to burstiness and overdispersion, while long-term persistent heterogeneity in…

Populations and Evolution · Quantitative Biology 2022-05-04 Alexei V. Tkachenko , Sergei Maslov , Ahmed Elbanna , George N. Wong , Zachary J. Weiner , Nigel Goldenfeld

We report a first in modeling and simulation of the effects of the HIV proteins on the (caspase dependent) apoptotic pathway in infected cells. This work is novel and is an extension on the recent reports and clarifications on the FAS…

Molecular Networks · Quantitative Biology 2007-05-23 John Jack , Andrei Paun