English
Related papers

Related papers: Electrostatic Energy Calculations for Molecular Dy…

200 papers

We describe a formalism for calculating electroweak Sudakov logarithms in the Coulomb gauge. This formalism is applicable to arbitrary electroweak processes. For illustration we focus on the specific reactions e^+e^- -> f \bar{f} and e^+e^-…

High Energy Physics - Phenomenology · Physics 2009-10-31 W. Beenakker , A. Werthenbach

A purely group-theoretical approach (for which the symmetric group plays a central r\^ole), based upon the use of properties of fractional-parentage coefficients and isoscalar factors, is developed for the derivation of the Coulomb energy…

atom-ph · Physics 2008-02-03 M. Kibler , Yu. F. Smirnov

Straight line trajectories are commonly used in semi-classical calculations of the first-order Coulomb excitation cross section at intermediate energies, and simple corrections are often made for the distortion of the trajectories that is…

Nuclear Theory · Physics 2008-11-26 H. Esbensen

Atomic forces are calculated for first-row monohydrides and carbon monoxide within electronic quantum Monte Carlo (QMC). Accurate and efficient forces are achieved by using an improved method for moving variational parameters in variational…

Chemical Physics · Physics 2009-11-10 Myung Won Lee , Massimo Mella , Andrew M. Rappe

Ewald summation is widely used to calculate electrostatic interactions in computer simulations of condensed-matter systems. We present an analysis of the errors arising from truncating the infinite real- and Fourier-space lattice sums in…

chem-ph · Physics 2016-08-31 Gerhard Hummer

We present an efficient approach for simulating Coulomb systems confined by planar polarizable surfaces. The method is based on the solution of Poisson equation using periodic Green functions. It is shown that the electrostatic energy…

Soft Condensed Matter · Physics 2017-12-12 Alexandre P. dos Santos , Matheus Girotto , Yan Levin

One-dimensional ideal diatomic gas is simulated through possible types of motion of a molecule. Energy of each type of its motion is calculated from theory and numerical method. Calculation of kinetic energy of an atom in…

Chemical Physics · Physics 2014-02-11 Siti Nurul Khotimah , Sparisoma Viridi , Widayani , Abdul Waris

A proper treatment of electrostatic interactions is crucial for the accurate calculation of forces in computer simulations. Electrostatic interactions are typically modeled using Ewald based methods, which have become one of the…

Soft Condensed Matter · Physics 2016-09-21 K. A. Terrón-Mejía , R. López-Rendón , A. Gama Goicochea

We present a clear and rigorous derivation of the Ewald-like method for calculation of the electrostatic energy of the systems infinitely periodic in two-dimensions and of finite size in the third dimension (slabs) which is significantly…

Materials Science · Physics 2009-10-30 E. Wasserman , J. R. Rustad , A. R. Felmy , B. P. Hay , J. W. Halley

The efficiency of the variational perturbation theory [Phys. Rev. C {\bf 62}, 045503 (2000)] formulated recently for many-particle systems is examined by calculating the ground state correlation energy of the 3D electron gas with the…

Strongly Correlated Electrons · Physics 2009-11-07 Sang Koo You , Noboru Fukushima

Long ranged electrostatic interactions are time consuming to calculate in molecular dynamics and Monte-Carlo simulations. We introduce an algorithmic framework for simulating charged particles which modifies the dynamics so as to allow…

Statistical Mechanics · Physics 2009-09-07 A. C. Maggs , V. Rossetto

An effective method based on Hubbard-Schofield approach [Phys. Lett. A {\bf 40}, 245 (1972)] is developed to calculate the free energy of classical Coulomb systems. This method significantly simplifies the derivation of the cluster…

Classical Physics · Physics 2007-05-23 J. Ortner

The quality of biomolecular simulations critically depends on the accuracy of the force field used to calculate the potential energy of the molecular configurations. Currently, most simulations employ non-polarisable force fields, which…

Biological Physics · Physics 2020-02-11 V. S. Sandeep Inakollu , Daan P. Geerke , Christopher N. Rowley , Haibo Yu

A computer adapted fluctuation formula for the calculation of the wavevector- and frequency-dependent dielectric permittivity for interaction site models of polar fluids within the Ewald summation technique is proposed and applied to…

Computational Physics · Physics 2009-10-31 Igor P. Omelyan

We show that finite-range alternatives to the standard long-range BKS pair potential for silica might be used in molecular dynamics simulations. We study two such models that can be efficiently simulated since no Ewald summation is…

Statistical Mechanics · Physics 2009-11-13 Antoine Carré , Ludovic Berthier , Juergen Horbach , Simona Ispas , Walter Kob

The methodology based on the association of the Variational Method with Supersymmetric Quantum Mechanics is used to evaluate the energy states of the confined hydrogen atom.

High Energy Physics - Theory · Physics 2015-06-26 Elso Drigo Filho , Regina Maria Ricotta

Large molecular dynamics simulations (millions of atoms, tens of microseconds, thousands of processors) hit the strong scalability wall: simulation on twice as many processors does not take half the time. Inspired by large N-body space…

Numerical Analysis · Computer Science 2013-10-21 Jana Pazúriková , Luděk Matyska

Atomic partial charges appear in the Coulomb term of many force-field models and can be derived from electronic structure calculations with a myriad of atoms-in-molecules (AIM) methods. More advanced models have also been proposed, using…

We investigate the Coulomb phase shift, and derive and analyze new and more precise analytical formulae. We consider next to leading order terms to the Stirling approximation, and show that they are important at small values of the angular…

Mathematical Physics · Physics 2017-03-29 J. C. A. Barata , L. F. Canto , M. S. Hussein

We derive analytic solutions for the potential and field in a one-dimensional system of masses or charges with periodic boundary conditions, in other words Ewald sums for one dimension. We also provide a set of tools for exploring the…

Mathematical Physics · Physics 2015-05-19 Bruce N. Miller , Jean-Louis Rouet