Related papers: Graphical Enumeration: A Species-Theoretic Approac…
In this paper, we address the problem of enumerating all induced subtrees in an input k-degenerate graph, where an induced subtree is an acyclic and connected induced subgraph. A graph G = (V, E) is a k-degenerate graph if for any its…
A seminal technique of theoretical physics called Wick's theorem interprets the Gaussian matrix integral of the products of the trace of powers of Hermitian matrices as the number of labelled maps with a given degree sequence, sorted by…
Graphlet analysis is an approach to network analysis that is particularly popular in bioinformatics. We show how to set up a system of linear equations that relate the orbit counts and can be used in an algorithm that is significantly…
In this paper we present a new Good Characterization of maximum genus of a graph which makes a common generalization of the works of Xuong, Liu, and Fu et al. Based on this, we find a new polynomially bounded algorithm to find the maximum…
Let $G=(V,E)$ be an undirected graph without loops and multiple edges. A subset $C\subseteq V$ is called \emph{identifying} if for every vertex $x\in V$ the intersection of $C$ and the closed neighbourhood of $x$ is nonempty, and these…
Graph theory provides fundamental concepts for many fields of science like statistical physics, network analysis and theoretical computer science. Here we give a pedagogical introduction to graph theory, divided into three sections. In the…
Given an underlying undirected simple graph, we consider the set of all acyclic orientations of its edges. Each of these orientations induces a partial order on the vertices of our graph and, therefore, we can count the number of linear…
Given a function $g=g(n)$ we let ${\mathcal E}^g$ be the class of all graphs $G$ such that if $G$ has order $n$ (that is, has $n$ vertices) then it is embeddable in some surface of Euler genus at most $g(n)$, and let ${\widetilde{\mathcal…
Our work studies the enumeration and random generation of unlabeled combinatorial classes of unrooted graphs. While the technique of vertex pointing provides a straightforward procedure for analyzing a labeled class of unrooted graphs by…
One of the major successes in computational biology has been the unification, using the graphical model formalism, of a multitude of algorithms for annotating and comparing biological sequences. Graphical models that have been applied…
A split graph is a graph whose vertices can be partitioned into a clique and a stable set. We investigate the combinatorial species of split graphs, providing species-theoretic generalizations of enumerative results due to B\'ina and…
Fan-planar graphs were recently introduced as a generalization of 1-planar graphs. A graph is fan-planar if it can be embedded in the plane, such that each edge that is crossed more than once, is crossed by a bundle of two or more edges…
We introduce a general class of algorithms and supply a number of general results useful for analysing these algorithms when applied to regular graphs of large girth. As a result, we can transfer a number of results proved for random…
We generalize the concept of token graphs to obtain supertoken graphs. In the latter case, there can be more than one token in a vertex. We formally define supertoken graphs and establish their basic properties. Moreover, we provide some…
We initiate the algorithmic study of retracting a graph into a cycle in the graph, which seeks a mapping of the graph vertices to the cycle vertices, so as to minimize the maximum stretch of any edge, subject to the constraint that the…
We use the theory of \Gamma-species to enumerate k-gonal and polygonal 2-trees with respect to their vertices. We then extend this result to enumerate "succulents", a tree-like class of graphs which generalize cacti.
The girth of a graph is the length of its shortest cycle. Due to its relevance in graph theory, network analysis and practical fields such as distributed computing, girth-related problems have been object of attention in both past and…
We consider two notions describing how one finite graph may be larger than another. Using them, we prove several theorems for such pairs that compare the number of spanning trees, the return probabilities of random walks, and the number of…
This note deals with the relationship between the total number of $k$-walks in a graph, and the sum of the $k$-th powers of its vertex degrees. In particular, it is shown that the the number of all $k$-walks is upper bounded by the sum of…
This is an expository paper. A $1$-cycle in a graph is a set $C$ of edges such that every vertex is contained in an even number of edges from $C$. E.g., a cycle in the sense of graph theory is a $1$-cycle, but not vice versa. It is easy to…