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A notion of branch-width, which generalizes the one known for graphs, can be defined for matroids. We first give a proof of the polynomial time model-checking of monadic second-order formulas on representable matroids of bounded…
Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…
We study tree languages that can be defined in \Delta_2 . These are tree languages definable by a first-order formula whose quantifier prefix is forall exists, and simultaneously by a first-order formula whose quantifier prefix is . For the…
We use the recently developed theory of forest algebras to find algebraic characterizations of the languages of unranked trees and forests definable in various logics. These include the temporal logics CTL and EF, and first-order logic over…
Elementary arguments show that a tree or forest is determined (up to isomorphism) by binary matroids defined using the adjacency matrix.
We define decision trees for monotone functions on a simplicial complex. We define homology decidability of monotone functions, and show that various monotone functions related to semimatroids are homology decidable. Homology decidability…
The first-order theory of finite and infinite trees has been studied since the eighties, especially by the logic programming community. Following Djelloul, Dao and Fr\"uhwirth, we consider an extension of this theory with an additional…
This paper shows that over infinite trees, satisfiability is decidable for weak monadic second-order logic extended by the unbounding quantifier U and quantification over infinite paths. The proof is by reduction to emptiness for a certain…
An extension of order theory is presented that serves as a formalism for the study of dendroidal sets analogously to way the formalism of order theory is used in the study of simplicial sets.
We introduce a first-order theory of finite full binary trees and then identify decidable and undecidable fragments of this theory. We show that the analogue of Hilbert`s 10th Problem is undecidable by constructing a many-to-one reduction…
This paper defines a notion of binding trees that provide a suitable model for second-order type systems with F-bounded quantifiers and equirecursive types. It defines a notion of regular binding trees that correspond in the right way to…
We identify the complexity of the classification problem for automorphisms of a given countable regularly branching tree up to conjugacy. We consider both the rooted and unrooted cases. Additionally, we calculate the complexity of the…
A monotone grid class is a permutation class (i.e., a downset of permutations under the containment order) defined by local monotonicity conditions. We give a simplified proof of a result of Murphy and Vatter that monotone grid classes of…
For any first order theory T we construct a Boolean valued model M, in which precisely the T--provable formulas hold, and in which every (Boolean valued) subset which is invariant under all automorphisms of M is definable by a first order…
We prove that the theory of Monadic Second-Order logic (MSO) of the infinite binary tree extended with qualitative path-measure quantifier is undecidable. This quantifier says that the set of infinite paths in the tree that satisfies some…
We consider the problem of computing the measure of a regular set of infinite binary trees. While the general case remains unsolved, we show that the measure of a language can be computed when the set is given in one of the following three…
This paper studies tree-automatic ordinals (or equivalently, well-founded linearly ordered sets) together with the ordinal addition operation +. Informally, these are ordinals such that their elements are coded by finite trees for which the…
Connected acyclic graphs (trees) are data objects that hierarchically organize categories. Collections of trees arise in a diverse variety of fields, including evolutionary biology, public health, machine learning, social sciences and…
Here it is shown that standard set theory can be interpreted in a theory about order. The ordering here is about non-extensional flat classes, i.e. classes that are not elements of classes. So, stipulating a nearly well order over all those…
Using Machine Learning systems in the real world can often be problematic, with inexplicable black-box models, the assumed certainty of imperfect measurements, or providing a single classification instead of a probability distribution. This…