Related papers: Compactness and Measures of Noncompactness in Metr…
In this work we define a novel edit distance for trees considered with some abstract weights on the edges. The metric is driven by the idea of considering trees as topological summaries in the context of persistence and topological data…
We study the geometry of metrics and convexity structures on the space of phylogenetic trees, which is here realized as the tropical linear space of all \ ultrametrics. The ${\rm CAT}(0)$-metric of Billera-Holmes-Vogtman arises from the…
In a recent paper Chatterji and Niblo proved that a geodesic metric space is Gromov hyperbolic if and only if the intersection of any two closed balls has uniformly bounded eccentricity. In their paper, the authors raise the question…
We define a notion of coordinatization for $\aleph_0$-categorical structures which is, like Lie coordinatized structures in [2], a certain kind of expansion of a tree. We show that a structure which is coordinatized, in a certain strong…
Let $G=(V,E)$ be a simple, unweighted, connected graph. Let $d(u,v)$ denote the distance between vertices $u,v$. A resolving set of $G$ is a subset $S$ of $V$ such that knowing the distance from a vertex $v$ to every vertex in $S$ uniquely…
We study two graph parameters defined via tree decompositions: tree-independence number and induced matching treewidth. Both parameters are defined similarly as treewidth, but with respect to different measures of a tree decomposition…
Let $G = (V,E)$ denote a simple graph with the vertex set $V$ and the edge set $E$. The profile of a vertex set $V'\subseteq V$ denotes the multiset of pairwise distances between the vertices of $V'$. Two disjoint subsets of $V$ are…
The conventional definition of a topological metric over a space specifies properties that must be obeyed by any measure of "how separated" two points in that space are. Here it is shown how to extend that definition, and in particular the…
A set of vertices $S$ \emph{resolves} a graph $G$ if every vertex is uniquely determined by its vector of distances to the vertices in $S$. The \emph{metric dimension} of a graph $G$ is the minimum cardinality of a resolving set. In this…
Let $T$ be a weighted tree. The weight of a subtree $T_1$ of $T$ is defined as the product of weights of vertices and edges of $T_1$. We obtain a linear-time algorithm to count the sum of weights of subtrees of $T$. As applications, we…
Distances on merge trees facilitate visual comparison of collections of scalar fields. Two desirable properties for these distances to exhibit are 1) the ability to discern between scalar fields which other, less complex topological…
The metric dimension of a graph $G$ is the minimal size of a subset $R$ of vertices of $G$ that, upon reporting their graph distance from a distingished (source) vertex $v^\star$, enable unique identification of the source vertex $v^\star$…
The \textit{eccentricity matrix} $\mathcal{E}(G)$ of a connected graph $G$ is obtained from the distance matrix of $G$ by keeping the largest non-zero entries in each row and each column, and leaving zeros in the remaining ones. The…
Robustness is a property of system analyses, namely monotonic maps from the complete lattice of subsets of a (system's state) space to the two-point lattice. The definition of robustness requires the space to be a metric space. Robust…
It is well-known that point-set topology (without additional structure) lacks the capacity to generalize the analytic concepts of completeness, boundedness, and other typically-metric properties. The ability of metric spaces to capture this…
A {\em tree cover} of a metric space $(X,d)$ is a collection of trees, so that every pair $x,y\in X$ has a low distortion path in one of the trees. If it has the stronger property that every point $x\in X$ has a single tree with low…
A compacted binary tree is a graph created from a binary tree such that repeatedly occurring subtrees in the original tree are represented by pointers to existing ones, and hence every subtree is unique. Such representations form a special…
Combinatorial trees can be used to represent genealogies of asexual individuals. These individuals can be endowed with birth and death times, to obtain a so-called `chronological tree'. In this work, we are interested in the continuum…
We give two examples of metric measure spaces satisfying the measure contraction property MCP(K,N) but having different topological dimensions at different regions of the space. The first one satisfies MCP(0,3) and contains a subset…
The threshold-$k$ metric dimension ($\mathrm{Tmd}_k$) of a graph is the minimum number of sensors -- a subset of the vertex set -- needed to uniquely identify any vertex in the graph, solely based on its distances from the sensors, when the…