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Causal reasoning has been an indispensable capability for humans and other intelligent animals to interact with the physical world. In this work, we propose to endow an artificial agent with the capability of causal reasoning for completing…

Machine Learning · Computer Science 2019-10-07 Suraj Nair , Yuke Zhu , Silvio Savarese , Li Fei-Fei

Directed covers of finite graphs are also known as periodic trees or trees with finitely many cone types. We expand the existing theory of directed covers of finite graphs to those of infinite graphs. While the lower growth rate still…

Probability · Mathematics 2009-10-05 Lorenz A. Gilch , Sebastian Müller

Nested structure, which is non-random, controls cooperation dynamics and biodiversity in plant-animal mutualistic networks. This structural pattern has been explained in a static (non-growth) network models. However, evolutionary processes…

Populations and Evolution · Quantitative Biology 2015-03-19 Kazuhiro Takemoto , Masanori Arita

Many research fields, reaching from social networks and epidemiology to biology and physics, have experienced great advance from recent developments in random graphs and network theory. In this paper we propose to view percolation on a…

Soft Condensed Matter · Physics 2019-08-21 Verena Schamboeck , Piet D. Iedema , Ivan Kryven

We define a growing model of random graphs. Given a sequence of nonnegative integers $\{d_n\}_{n=0}^\infty$ with the property that $d_i\leq i$, we construct a random graph on countably infinitely many vertices $v_0,v_1\ldots$ by the…

Combinatorics · Mathematics 2017-04-04 Csaba Biró , Udayan B. Darji

A fluorescent image analysis procedure to determine the distribution of species concentration and density in a gas flow is proposed. The fluorescent emission is due to the excitation of atoms/molecules of a gas that is intercepted by an…

Fluid Dynamics · Physics 2009-11-13 Marco Belan , Sergio De Ponte , Daniela Tordella

We introduce a new arc in directed graphs of integers. Among other things, we determine the positive integers that have arcs to all except a finite number of positive integers. We also propose some possible research problems at the end of…

Number Theory · Mathematics 2023-03-24 Phakhinkon Napp Phunphayap , Passawan Noppakaew , Prapanpong Pongsriiam

Random walks on general graphs play an important role in the understanding of the general theory of stochastic processes. Beyond their fundamental interest in probability theory, they arise also as simple models of physical systems. A brief…

Probability · Mathematics 2016-09-07 Massimo Campanino , Dimitri Petritis

In this paper it is shown that it is possible to associate several polynomial ideals to a directed graph $D$ in order to find properties of it. In fact by using algebraic tools it is possible to give appropriate procedures for automatic…

Commutative Algebra · Mathematics 2007-05-23 Giuseppa Carrá Ferro , Daniela Ferrarello

Modern RNA sequencing technologies provide gene expression measurements from single cells that promise refined insights on regulatory relationships among genes. Directed graphical models are well-suited to explore such (cause-effect)…

Methodology · Statistics 2020-04-09 Shiqing Yu , Mathias Drton , Ali Shojaie

Directed graphs naturally model systems with asymmetric, ordered relationships, essential to applications in biology, transportation, social networks, and visual understanding. Generating such graphs enables tasks such as simulation, data…

Machine Learning · Computer Science 2026-02-20 Alba Carballo-Castro , Manuel Madeira , Yiming Qin , Dorina Thanou , Pascal Frossard

In recent years, Graph Neural Networks (GNNs) have made significant advances in processing structured data. However, most of them primarily adopted a model-centric approach, which simplifies graphs by converting them into undirected formats…

Machine Learning · Computer Science 2024-12-12 Henan Sun , Xunkai Li , Daohan Su , Junyi Han , Rong-Hua Li , Guoren Wang

We show a flow-augmentation algorithm in directed graphs: There exists a randomized polynomial-time algorithm that, given a directed graph $G$, two vertices $s,t \in V(G)$, and an integer $k$, adds (randomly) to $G$ a number of arcs such…

Data Structures and Algorithms · Computer Science 2023-02-16 Eun Jung Kim , Stefan Kratsch , Marcin Pilipczuk , Magnus Wahlström

We define a lattice model for rock, absorbers, and gas that makes it possible to examine the flow of gas to a complicated absorbing boundary over long periods of time. The motivation is to deduce the geometry of the boundary from the time…

Soft Condensed Matter · Physics 2018-04-04 M. Marder , Behzad Eftekhari , Tadeusz W Patzek

Adaptive networks model social, physical, technical, or biological systems as attributed graphs evolving at the level of both their topology and data. They are naturally described by graph transformation, but the majority of authors take an…

Discrete Mathematics · Computer Science 2021-12-22 Nicolas Behr , Bello Shehu Bello , Sebastian Ehmes , Reiko Heckel

We propose a procedure to generate dynamical networks with bursty, possibly repetitive and correlated temporal behaviors. Regarding any weighted directed graph as being composed of the accumulation of paths between its nodes, our…

Physics and Society · Physics 2013-04-10 Alain Barrat , Bastien Fernandez , Kevin K Lin , Lai-Sang Young

Graph Convolutional Networks (GCNs) have been widely used due to their outstanding performance in processing graph-structured data. However, the undirected graphs limit their application scope. In this paper, we extend spectral-based graph…

Machine Learning · Computer Science 2020-04-30 Zekun Tong , Yuxuan Liang , Changsheng Sun , David S. Rosenblum , Andrew Lim

We present a probabilistic model for natural images which is based on Gaussian scale mixtures and a simple multiscale representation. In contrast to the dominant approach to modeling whole images focusing on Markov random fields, we…

Machine Learning · Statistics 2012-09-17 Lucas Theis , Reshad Hosseini , Matthias Bethge

Many real-world networks are intrinsically directed. Such networks include activation of genes, hyperlinks on the internet, and the network of followers on Twitter among many others. The challenge, however, is to create a network model that…

Social and Information Networks · Computer Science 2022-04-15 Jesse Michel , Sushruth Reddy , Rikhav Shah , Sandeep Silwal , Ramis Movassagh

The displayed tree phylogenetic network model is shown to sit as a natural submodel of the graphical model associated to a directed acyclic graph (DAG). This representation allows to derive a number of results about the displayed tree…

Populations and Evolution · Quantitative Biology 2025-08-01 Seth Sullivant