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A neighborhood homotopy is an equivalence relation on spatial graphs which is generated by crossing changes on the same component and neighborhood equivalence. We give a complete classification of all 2-component spatial graphs up to…

Geometric Topology · Mathematics 2020-05-19 Atsuhiko Mizusawa , Ryo Nikkuni

We propose a novel method for topological analysis of unweighted graphs which is based on \textit{persistent homology}. The proposed method maps the input graph to a complete weighted graph where the weighting function maps each edge to a…

Algebraic Topology · Mathematics 2020-07-31 Padraig Corcoran

We review Heisenberg homology of configurations in once bounded surfaces and extend the construction to the regular thickening of a finite graph with ribbon structure.

Geometric Topology · Mathematics 2025-02-11 Christian Blanchet

Khovanov homology of a link and chromatic graph homology are known to be isomorphic in a range of homological gradings that depend on the girth of a graph. We discuss patterns shared by these two homology theories. In particular, we improve…

Geometric Topology · Mathematics 2018-01-08 Radmila Sazdanovic , Daniel Scofield

We propose a notion of graph convergence that interpolates between the Benjamini--Schramm convergence of bounded degree graphs and the dense graph convergence developed by L\'aszl\'o Lov\'asz and his coauthors. We prove that spectra of…

Combinatorics · Mathematics 2017-12-27 Péter E. Frenkel

Persistent homology is a natural tool for probing the topological characteristics of weighted graphs, essentially focusing on their $0$-dimensional homology. While this area has been substantially studied, we present a new approach to…

Algebraic Topology · Mathematics 2023-10-03 Omer Bobrowski , Primoz Skraba

It is known that knot homologies admit a physical description as spaces of open BPS states. We study operators and algebras acting on these spaces. This leads to a very rich story, which involves wall crossing phenomena, algebras of closed…

High Energy Physics - Theory · Physics 2016-01-20 Sergei Gukov , Marko Stosic

A homomorphism from a graph $G$ to a graph $H$ is an edge-preserving mapping from $V(G)$ to $V(H)$. Let $H$ be a fixed graph with possible loops. In the list homomorphism problem, denoted by \textsc{LHom}($H$), the instance is a graph $G$,…

Data Structures and Algorithms · Computer Science 2022-02-21 Sándor Kisfaludi-Bak , Karolina Okrasa , Paweł Rzążewski

Representational limits of message-passing graph neural networks (MP-GNNs), e.g., in terms of the Weisfeiler-Leman (WL) test for isomorphism, are well understood. Augmenting these graph models with topological features via persistent…

Machine Learning · Computer Science 2023-11-13 Johanna Immonen , Amauri H. Souza , Vikas Garg

Hoffman's bound is a well-known eigenvalue bound on the chromatic number of a graph. By interpreting this bound as a parameter, we show multiple applications of colorings attaining the bound (Hoffman colorings) for several notions of graph…

Combinatorics · Mathematics 2025-08-27 Aida Abiad , Bart De Bruyn , Thijs van Veluw

Hypergraphs have seen widespread application in network and data science communities in recent years. We present a survey of recent work to construct auxiliary structures from hypergraphs -- specifically simplicial, relative, and chain…

Algebraic Topology · Mathematics 2025-10-14 Ellen Gasparovic , Emilie Purvine , Radmila Sazdanovic , Bei Wang , Yusu Wang , Lori Ziegelmeier

A $k$-coloring of a tournament is a partition of its vertices into $k$ acyclic sets. Deciding if a tournament is 2-colorable is NP-hard. A natural problem, akin to that of coloring a 3-colorable graph with few colors, is to color a…

Data Structures and Algorithms · Computer Science 2024-11-25 Felix Klingelhoefer , Alantha Newman

Testing for independence between graphs is a problem that arises naturally in social network analysis and neuroscience. In this paper, we address independence testing for inhomogeneous Erd\H{o}s-R\'{e}nyi random graphs on the same vertex…

Methodology · Statistics 2023-04-19 Yukun Song , Carey E. Priebe , Minh Tang

The problem of chromatic thresholds seeks for minimum degree conditions that ensure $H$-free graphs to have a bounded chromatic number, or equivalently a bounded size homomorphic image. The strengthened homomorphism thresholds problem…

Combinatorics · Mathematics 2025-02-14 Xinqi Huang , Hong Liu , Mingyuan Rong , Zixiang Xu

Grebinski and Kucherov (1998) and Alon et al. (2004-2005) study the problem of learning a hidden graph for some especial cases, such as hamiltonian cycle, cliques, stars, and matchings. This problem is motivated by problems in chemical…

Data Structures and Algorithms · Computer Science 2023-06-22 Hamid Kameli

High order networks are weighted hypergraphs col- lecting relationships between elements of tuples, not necessarily pairs. Valid metric distances between high order networks have been defined but they are difficult to compute when the…

Social and Information Networks · Computer Science 2016-05-04 Weiyu Huang , Alejandro Ribeiro

We investigate a notion of $\times$-homotopy of graph maps that is based on the internal hom associated to the categorical product in the category of graphs. It is shown that graph $\times$-homotopy is characterized by the topological…

Combinatorics · Mathematics 2008-07-07 Anton Dochtermann

To any Feynman graph (with 2n edges) we can associate a hypersurface X\subset\PP^{2n-1}. We study the middle cohomology H^{2n-2}(X) of such hypersurfaces. S. Bloch, H. Esnault, and D. Kreimer (Commun. Math. Phys. 267, 2006) have computed…

Algebraic Geometry · Mathematics 2008-11-05 Dzmitry Doryn

Consider a graph whose vertices are colored in one of two colors, say black or white. A white vertex is called integrated if it has at least as many black neighbors as white neighbors, and similarly for a black vertex. The coloring as a…

Combinatorics · Mathematics 2025-06-10 Charles Burnette , Broden Caton , Olivia Coward , Julian Davis , Austin Teter

A coloring of a graph is an assignment of colors to its vertices such that adjacent vertices have different colors. Two colorings are equivalent if they induce the same partition of the vertex set into color classes. Let $\mathcal{A}(G)$ be…

Combinatorics · Mathematics 2024-03-11 Alain Hertz , Hadrien Mélot , Sébastien Bonte , Gauvain Devillez , Pierre Hauweele
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