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This paper provides the reader with a very brief introduction to some of the theory and methods of text data mining. The intent of this article is to introduce the reader to some of the current methodologies that are employed within this…
Modern biology frequently relies on machine learning to provide predictions and improve decision processes. There have been recent calls for more scrutiny on machine learning performance and possible limitations. Here we present a set of…
A notion of biologic system or just a system implies a functional wholeness of comprising system components. Positive and negative feedback are the examples of how the idea to unite anatomical elements in the whole functional structure was…
Human language and its governing rules present a number of analogies with the organization and structure of communication and information management in living organisms. This chapter will provide a short general introduction about grammar,…
This paper addresses problems on the structural design of control systems taking explicitly into consideration the possible application to large-scale systems. We provide an efficient and unified framework to solve the following major…
Recently we presented a concise survey of the formulation of the induction and coinduction principles, and some concepts related to them, in five different fields mathematical fields, hence shedding some light on the precise relation…
Considering voting rules based on evaluation inputs rather than preference rankings modifies the paradigm of probabilistic studies of voting procedures. This article proposes several simulation models for generating evaluation-based voting…
This short paper provides a means to classify augmentation technologies to reconceptualize them as sociotechnical, discursive and rhetorical phenomena, rather than only through technological classifications. It identifies a set of value…
We describe here our perception of complex systems, of how we feel the different layers of description are important part of a correct complex system simulation. We describe a rough models categorization between rules based and law based,…
Advances in science are being sought in newly available opportunities to collect massive quantities of data about complex systems. While key advances are being made in detailed mapping of systems, how to relate this data to solving many of…
In its broadest definition, systems biology is the application of a `systems' way of thinking about and doing cell biology. By implication, this also invites us to consider a systems approach in the context of medicine and the treatment of…
Current practice for evaluating recommender systems typically focuses on point estimates of user-oriented effectiveness metrics or business metrics, sometimes combined with additional metrics for considerations such as diversity and…
Synthetic biology is a recent area of biological engineering, whose aim is to provide cells with novel functionalities. A number of important results regarding the development of control circuits in synthetic biology have been achieved…
Systems thinking is a way of making sense about the world in terms of multilevel, nested, interacting systems, their environment, and the boundaries between the systems and the environment. In this paper we discuss the evolution of systems…
Recently people started to understand that applications of the mathematical formalism of quantum theory are not reduced to physics. Nowadays, this formalism is widely used outside of quantum physics, in particular, in cognition, psychology,…
Existential rules are an expressive knowledge representation language mainly developed to query data. In the literature, they are often supposed to be in some normal form that simplifies technical developments. For instance, a common…
038<p type="texpara" tag="Body Text" >The identification theory and realization of the dynamic systems is a medullary aspect in the modern control theory that consists fundamentally in that, starting from the knowledge of the behavior…
This paper explores epistemic realizability, a form of realizability in which the property that a piece of data constitutes evidence for a logical proposition is semi-decidable. In this framework, each proposition A is assigned a verifier}…
This is my attempt to answer Schr\"odinger's question: "What is Life?". In living cell the local combination of atoms is reproduced with incredible accuracy. In the case of protein biosynthesis the notion of the physical aspect of the…
A fundamental problem in medicine and biology is to assign states, e.g. healthy or diseased, to cells, organs or individuals. State assignment or making a diagnosis is often a nontrivial and challenging process and, with the advent of omics…