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Related papers: Toric fiber products

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The toric fiber product is a general procedure for gluing two ideals, homogeneous with respect to the same multigrading, to produce a new homogeneous ideal. Toric fiber products generalize familiar constructions in commutative algebra like…

Commutative Algebra · Mathematics 2014-05-12 Alexander Engstrom , Thomas Kahle , Seth Sullivant

The toric fiber product is an operation that combines two ideals that are homogeneous with respect to a grading by an affine monoid. The Segre product is a related construction that combines two multigraded rings. The quotient ring by a…

Commutative Algebra · Mathematics 2016-04-08 Thomas Kahle , Johannes Rauh

In combinatorial commutative algebra and algebraic statistics many toric ideals are constructed from graphs. Keeping the categorical structure of graphs in mind we give previous results a more functorial context and generalize them by…

Commutative Algebra · Mathematics 2011-10-04 Alexander Engstrom , Patrik Noren

In this article we consider the problem of finding generators of the toric ideal associated to a combinatorial object called a staged tree. Our main theorem states that toric ideals of staged trees that are balanced and stratified are…

Commutative Algebra · Mathematics 2021-04-21 Lamprini Ananiadi , Eliana Duarte

Characteristic imsets are 0-1 vectors which correspond to Markov equivalence classes of directed acyclic graphs. The study of their convex hull, named the characteristic imset polytope, has led to new and interesting geometric perspectives…

Statistics Theory · Mathematics 2024-05-22 Benjamin Hollering , Joseph Johnson , Irem Portakal , Liam Solus

In this paper, we discuss the normality of the toric rings of stable set polytopes, and the set of generators and Gr\"obner bases of toric ideals of stable set polytopes by using the results on that of edge polytopes of finite nonsimple…

Commutative Algebra · Mathematics 2019-07-12 Kazunori Matsuda , Hidefumi Ohsugi , Kazuki Shibata

We consider the phylogenetic tree model in which every node of the tree is observed and binary and the transitions are given by the same matrix on each edge of the tree. We are able to compute the Grobner basis and Markov basis of the toric…

Combinatorics · Mathematics 2007-05-23 Nicholas Eriksson

The edges of any hypergraph parametrize a monomial algebra called the edge subring of the hypergraph. We study presentation ideals of these edge subrings, and describe their generators in terms of balanced walks on hypergraphs. Our results…

Commutative Algebra · Mathematics 2013-04-23 Sonja Petrović , Despina Stasi

To any toric ideal $I_A$, encoded by an integer matrix $A$, we associate a matroid structure called {\em the bouquet graph} of $A$ and introduce another toric ideal called {\em the bouquet ideal} of $A$. We show how these objects capture…

Commutative Algebra · Mathematics 2017-11-08 Sonja Petrović , Apostolos Thoma , Marius Vladoiu

We study how to lift Markov bases and Gr\"obner bases along linear maps of lattices. We give a lifting algorithm that allows to compute such bases iteratively provided a certain associated semigroup is normal. Our main application is the…

Commutative Algebra · Mathematics 2015-07-28 Johannes Rauh , Seth Sullivant

The goal of this paper is to present examples of families of homogeneous ideals in the polynomial ring over a field that satisfy the following condition: every product of ideals of the family has a linear free resolution. As we will see,…

Commutative Algebra · Mathematics 2016-02-26 Winfried Bruns , Aldo Conca

The content of a polynomial $f(t)$ is the ideal generated by its coefficients. Our aim here is to consider a beautiful formula of Dedekind-Mertens on the content of the product of two polynomials, to explain some of its features from the…

Commutative Algebra · Mathematics 2007-05-23 Alberto Corso , Wolmer V. Vasconcelos , Rafael Villarreal

Given any equigenerated monomial ideal $I$ with the property that the defining ideal $J$ of the fiber cone $ F(I)$ of $I$ is generated by quadratic binomials, we introduce a matrix such that the set of its binomial $2$-minors is a…

Commutative Algebra · Mathematics 2021-06-09 Reza Abdolmaleki , Rashid Zaare-Nahandi

Statistical models of evolution are algebraic varieties in the space of joint probability distributions on the leaf colorations of a phylogenetic tree. The phylogenetic invariants of a model are the polynomials which vanish on the variety.…

Populations and Evolution · Quantitative Biology 2007-05-23 Bernd Sturmfels , Seth Sullivant

We introduce the theory of monoidal Groebner bases, a concept which generalizes the familiar notion in a polynomial ring and allows for a description of Groebner bases of ideals that are stable under the action of a monoid. The main…

Commutative Algebra · Mathematics 2011-08-25 Christopher J. Hillar , Seth Sullivant

The toric ring together with the toric ideal arising from a nested configuration is studied, with particular attention given to the algebraic study of normality of the toric ring as well as the Gr\"obner bases of the toric ideal. One of the…

Commutative Algebra · Mathematics 2011-05-24 Hidefumi Ohsugi , Takayuki Hibi

Given a finite, simple, vertex-weighted graph, we construct a graded associative (non-commutative) algebra, whose generators correspond to vertices and whose ideal of relations has generators that are graded commutators corresponding to…

Algebraic Topology · Mathematics 2012-06-13 Peter Bubenik , Leah H. Gold

In this paper we study monomial ideals attached to posets, introduce generalized Hibi rings and investigate their algebraic and homological properties. The main tools to study these objects are Groebner basis theory, the concept of…

Commutative Algebra · Mathematics 2015-10-09 Viviana Ene , Juergen Herzog , Fatemeh Mohammadi

We develop the theory of Gr\"obner bases for ideals in a polynomial ring with countably infinite variables over a field. As an application we reconstruct some of the one-one correspondences among various sets of partitions by using division…

Commutative Algebra · Mathematics 2008-06-04 Kei-ichiro Iima , Yuji Yoshino

We investigate the structure of ideals generated by binomials (polynomials with at most two terms) and the schemes and varieties associated to them. The class of binomial ideals contains many classical examples from algebraic geometry, and…

alg-geom · Mathematics 2008-02-03 David Eisenbud , Bernd Sturmfels
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