Related papers: Counting unrooted maps using tree-decomposition
Trees or rooted trees have been generously studied in the literature. A forest is a set of trees or rooted trees. Here we give recurrence relations between the number of some kind of rooted forest with $k$ roots and that with $k+1$ roots on…
A string-like compact data structure for unlabelled rooted trees is given using 2n bits.
Drawing together techniques from combinatorics and computer science, we improve the census algorithm for enumerating closed minimal P^2-irreducible 3-manifold triangulations. In particular, new constraints are proven for face pairing…
Large language models achieve strong reasoning performance, yet existing decoding strategies either explore blindly (random sampling) or redundantly (independent multi-sampling). We propose Entropy-Tree, a tree-based decoding method that…
Rooted bifurcating trees are mathematical objects used to model evolutionary relationships and arise naturally in both coalescent theory and phylogenetics. Recent numerical representations of tree topologies, known as F-matrices, allow for…
In an exploration paper, {\it L. Chen, Algorithms for Deforming and Contracting Simply Connected Discrete Closed Manifolds (I)}, we designed algorithms for deforming and contracting a simply connected discrete closed manifold to a discrete…
We consider the class of graphs for which the edge connectivity is equal to the maximum number of edge-disjoint spanning trees, and the natural generalization to matroids, where the cogirth is equal to the number of disjoint bases. We…
To comprehend the multipartite organization of large-scale biological and social systems, we introduce a new information theoretic approach that reveals community structure in weighted and directed networks. The method decomposes a network…
In the past 20 years, compactifications of the families of curves in algebraic varieties X have been studied via stable maps, Hilbert schemes, stable pairs, unramified maps, and stable quotients. Each path leads to a different enumeration…
A non-iterative method is presented for the factorization step of sector decomposition method, which separates infrared divergent part from loop integration. This method is based on a classification of asymptotic behavior of polynomials.…
We prove that finding a rooted subtree with at least $k$ leaves in a digraph is a fixed parameter tractable problem. A similar result holds for finding rooted spanning trees with many leaves in digraphs from a wide family $\cal L$ that…
The enumeration of maps and the study of uniform random maps have been classical topics of combinatorics and statistical physics ever since the seminal work of Tutte in the sixties. Following the bijective approach initiated by Cori and…
We present a general setting for structure-sequence comparison in a large class of RNA structures that unifies and generalizes a number of recent works on specific families on structures. Our approach is based on tree decomposition of…
The theory of sparse structures usually uses tree like structures as building blocks. In the context of sparse/dense dichotomy this role is played by graphs with bounded tree depth. In this paper we survey results related to this concept…
We present a novel method to perform numerical integration over curved polyhedra enclosed by high-order parametric surfaces. Such a polyhedron is first decomposed into a set of triangular and/or rectangular pyramids, whose certain faces…
Dendrograms used in data analysis are ultrametric spaces, hence objects of nonarchimedean geometry. It is known that there exist $p$-adic representation of dendrograms. Completed by a point at infinity, they can be viewed as subtrees of the…
Treewidth is a parameter that emerged from the study of minor closed classes of graphs (i.e. classes closed under vertex and edge deletion, and edge contraction). It in some sense describes the global structure of a graph. Roughly, a graph…
Motivated by the Bruhat and Cartan decompositions of general linear groups over local fields, double cosets of the group of label preserving automorphisms of a label-regular tree over the fixator of an end of the tree and over maximal…
We develop a new symbolic-numeric algorithm for the certification of singular isolated points, using their associated local ring structure and certified numerical computations. An improvement of an existing method to compute inverse systems…
The 3-decomposition conjecture is wide open. It asserts that every finite connected cubic graph can be decomposed into a spanning tree, a disjoint union of cycles, and a matching. We show that every such decomposition is derived from a…