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Related papers: Chord Diagrams and Gauss Codes for Graphs

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Learning embeddings from large-scale networks is an open challenge. Despite the overwhelming number of existing methods, is is unclear how to exploit network structure in a way that generalizes easily to unseen nodes, edges or graphs. In…

Machine Learning · Computer Science 2020-09-29 Nurudin Alvarez-Gonzalez , Andreas Kaltenbrunner , Vicenç Gómez

Cyclically ordered graphs, or cogs, sit between abstract graphs and cellularly embedded graphs. They arise naturally in topological graph theory, knot theory, and mathematical biology. We develop a formal theory of cogs and establish a…

Combinatorics · Mathematics 2025-11-18 Paul Bratch , M. N. Ellingham , Joanna A. Ellis-Monaghan , Iain Moffatt , Wout Moltmaker

In the branch of mathematics known as graph theory, graphs are considered as a set of points, called vertices, with connections between these points, called edges. The purpose of this paper is to study mappings between two graphs that have…

Combinatorics · Mathematics 2019-03-19 Jeffrey Beyerl , Cameron Sharpe

Graphs are widely used in various fields of computer science. They have also found application in unrelated areas, leading to a diverse range of problems. These problems can be modeled as relationships between entities in various contexts,…

Data Structures and Algorithms · Computer Science 2024-05-20 Davide Rucci

Compound graphs are networks in which vertices can be grouped into larger subsets, with these subsets capable of further grouping, resulting in a nesting that can be many levels deep. In several applications, including biological workflows,…

Human-Computer Interaction · Computer Science 2024-08-09 Chang Han , Justin Lieffers , Clayton Morrison , Katherine E. Isaacs

Graphs face challenges when dealing with massive datasets. They are essential tools for modeling interconnected data and often become computationally expensive. Graph embedding techniques, on the other hand, provide an efficient approach.…

Databases · Computer Science 2024-12-16 Plácido A Souza Neto

Graph analytics can lead to better quantitative understanding and control of complex networks, but traditional methods suffer from high computational cost and excessive memory requirements associated with the high-dimensionality and…

Machine Learning · Computer Science 2020-12-16 Mengjia Xu

The chordal ring (CR) graphs are a well-known family of graphs used to model some interconnection networks for computer systems in which all nodes are in a cycle. Generalizing the CR graphs, in this paper, we introduce the families of…

Combinatorics · Mathematics 2024-09-04 M. A. Reyes , C. Dalfó , M. A. Fiol

Chord diagrams are widely used for visualizing data connectivity and flow between nodes in a network. They are effective for representing complex structures through an intuitive and visually appealing circular layout. While previous work…

Human-Computer Interaction · Computer Science 2024-08-06 Kai Wang , Shuqi He , Wenlu Wang , Jinbei Yu , Yu Liu , Lingyun Yu

For a graph $G$, let $\sigma_{2}(G)$ be the minimum degree sum of two non-adjacent vertices in $G$. A chord of a cycle in a graph $G$ is an edge of $G$ joining two non-consecutive vertices of the cycle. In this paper, we prove the following…

Combinatorics · Mathematics 2018-08-14 Shuya Chiba , Suyun Jiang , Jin Yan

Connected networks are a fundamental structure of neurobiology. Understanding these networks will help us elucidate the neural mechanisms of computation. Mathematically speaking these networks are `graphs' - structures containing objects…

Neurons and Cognition · Quantitative Biology 2020-10-20 Carl J. Nelson , Stephen Bonner

Graph neural networks are deep neural networks designed for graphs with attributes attached to nodes or edges. The number of research papers in the literature concerning these models is growing rapidly due to their impressive performance on…

Machine Learning · Computer Science 2024-12-30 James H. Tanis , Chris Giannella , Adrian V. Mariano

IC-planar graphs are those graphs that admit a drawing where no two crossed edges share an end-vertex and each edge is crossed at most once. They are a proper subfamily of the 1-planar graphs. Given an embedded IC-planar graph $G$ with $n$…

Computational Geometry · Computer Science 2016-07-19 Franz J. Brandenburg , Walter Didimo , William S. Evans , Philipp Kindermann , Giuseppe Liotta , Fabrizio Montecchiani

A long-standing conjecture of Thomassen says that every longest cycle of a $3$-connected graph has a chord. Thomassen (2018) proved that if $G$ is $2$-connected and cubic, then any longest cycle must have a chord. He also showed that if $G$…

Combinatorics · Mathematics 2025-02-18 Haidong Wu , Shunzhe Zhang

Machine learning on graphs is an important and ubiquitous task with applications ranging from drug design to friendship recommendation in social networks. The primary challenge in this domain is finding a way to represent, or encode, graph…

Social and Information Networks · Computer Science 2018-04-11 William L. Hamilton , Rex Ying , Jure Leskovec

Recent advances in integrating positional and structural encodings (PSEs) into graph neural networks (GNNs) have significantly enhanced their performance across various graph learning tasks. However, the general applicability of these…

Machine Learning · Computer Science 2025-03-04 Billy Joe Franks , Moshe Eliasof , Semih Cantürk , Guy Wolf , Carola-Bibiane Schönlieb , Sophie Fellenz , Marius Kloft

The computation of distance measures between nodes in graphs is inefficient and does not scale to large graphs. We explore dense vector representations as an effective way to approximate the same information: we introduce a simple yet…

Computation and Language · Computer Science 2019-06-18 Andrey Kutuzov , Mohammad Dorgham , Oleksiy Oliynyk , Chris Biemann , Alexander Panchenko

In this paper we consider Contact graphs of Paths on a Grid (CPG graphs), i.e. graphs for which there exists a family of interiorly disjoint paths on a grid in one-to-one correspondence with their vertex set such that two vertices are…

Computational Geometry · Computer Science 2018-09-07 Zakir Deniz , Esther Galby , Andrea Munaro , Bernard Ries

Positional encodings (PEs) are essential for building powerful and expressive graph neural networks and graph transformers, as they effectively capture the relative spatial relationships between nodes. Although extensive research has been…

Machine Learning · Computer Science 2026-03-16 Yinan Huang , Haoyu Wang , Pan Li

Graph embedding is a transformation of nodes of a graph into a set of vectors. A~good embedding should capture the graph topology, node-to-node relationship, and other relevant information about the graph, its subgraphs, and nodes. If these…

Social and Information Networks · Computer Science 2022-06-22 Arash Dehghan-Kooshkghazi , Bogumił Kamiński , Łukasz Kraiński , Paweł Prałat , François Théberge