Related papers: A refinement of Cayley's formula for trees
Frequent tree mining asks us to enumerate tree patterns that occur frequently in a database of rooted trees. This problem is motivated by tree-structured data in bioinformatics, such as glycans and pseudoknot-free RNA secondary structures.…
We count the number of vertices in plane trees and $k$-ary trees with given outdegree, and prove that the total number of vertices of outdegree $i$ over all plane trees with $n$ edges is ${2n-i-1 \choose n-1}$, and the total number of…
We present a simple combinatorial proof of Postnikov's hook length formula for binary trees.
We investigate a trivariate polynomial associated with rooted trees. It generalises a bivariate polynomial for rooted trees that was recently introduced by Liu. We show that this polynomial satisfies a deletion-contraction recursion and can…
We find a simple, closed formula for the proportion of vertices which are $k$-protected in all unlabeled rooted plane trees on $n$ vertices. We also find that, as $n$ goes to infinity, the average rank of a random vertex in a tree of size…
This paper is a detailled study of the coding of real trees by real valued functions that is motivated by probabilistic problems related to continuum random trees. Indeed it is known since the works of Aldous (1993) and Le Gall (1991) that…
A rooted tree is balanced if the degree of a vertex depends only on its distance to the root. In this paper we determine the sharp threshold for the appearance of a large family of balanced spanning trees in the random geometric graph…
The recursive and hierarchical structure of full rooted trees is applicable to represent statistical models in various areas, such as data compression, image processing, and machine learning. In most of these cases, the full rooted tree is…
Given a rooted tree and a ranking of its leaves, what is the minimum number of inversions of the leaves that can be attained by ordering the tree? This variation of the problem of counting inversions in arrays originated in mathematical…
We prove that there is $c>0$ such that for all sufficiently large $n$, if $T_1,\dots,T_n$ are any trees such that $T_i$ has $i$ vertices and maximum degree at most $cn/\log n$, then $\{T_1,\dots,T_n\}$ packs into $K_n$. Our main result…
A perfect forest is a spanning forest of a connected graph $G$, all of whose components are induced subgraphs of $G$ and such that all vertices have odd degree in the forest. A perfect forest generalised a perfect matching since, in a…
Motivated by the properties of the descent polynomials, which enumerate permutations of $S_n$ with a fixed descent set, we define descent polynomials for labeled rooted trees. We give recursive and explicit formulas for these polynomials…
In this paper, we show how the notion of tree dimension can be used in the verification of constrained Horn clauses (CHCs). The dimension of a tree is a numerical measure of its branching complexity and the concept here applies to Horn…
Vertex deletion to hereditary graph class is well-studied in parameterized complexity. Vertex deletion to the scattered graph classes has gained attention in recent years. In this paper, we consider (Proper-Interval, Tree)-Vertex Deletion,…
We introduce the priority lattice, a structure arising from the priority search algorithm on rooted trees and forests. We prove bijectively that its maximal chains are labeled by parking functions, and that the maximal chains of its…
We calculate the exact number of contours of size $n$ containing a fixed vertex in $d$-ary trees and provide sharp estimates for this number for more general trees. We also obtain a characterization of the locally finite trees with…
Cayley's formula is a fundamental result in combinatorics that counts the number of labeled trees on n vertices. While existing proofs use approaches such as Prufer sequences and the Matrix-Tree Theorem, we give a combinatorial proof that…
The early development of a zygote can be mathematically described by a developmental tree. To compare developmental trees of different species, we need to define distances on trees. If children cells after a division are not…
Given a simple graph $G$, a weight function $w:E(G)\rightarrow \mathbb{N} \setminus \{0\}$, and an orientation $D$ of $G$, we define $\mu^-(D) = \max_{v \in V(G)} w_D^-(v)$, where $w^-_D(v) = \sum_{u\in N_D^{-}(v)}w(uv)$. We say that $D$ is…
We define, analyze, and give efficient algorithms for two kinds of distance measures for rooted and unrooted phylogenies. For rooted trees, our measures are based on the topologies the input trees induce on triplets; that is, on…