Related papers: Edit Distance between Unlabeled Ordered Trees
A semiorder is a partially ordered set $P$ with two certain forbidden induced subposets. This paper establishes a bijection between $n$-element semiorders of length $H$ and $(n+1)$-node ordered trees of height $H+1$. This bijection…
The diagram of a 132-avoiding permutation can easily be characterized: it is simply the diagram of a partition. Based on this fact, we present a new bijection between 132-avoiding and 321-avoiding permutations. We will show that this…
An added edge to a graph is called an inset edge. Predicting k inset edges which minimize the average distance of a graph is known to be NP-Hard. When k = 1 the complexity of the problem is polynomial. In this paper, we further find the…
We consider the approximate pattern matching problem under the edit distance. Given a text $T$ of length $n$, a pattern $P$ of length $m$, and a threshold $k$, the task is to find the starting positions of all substrings of $T$ that can be…
A permutation is called Grassmannian if it has at most one descent. In this paper, we investigate pattern avoidance and parity restrictions for such permutations. As our main result, we derive formulas for the enumeration of Grassmannian…
In this paper we present a simple framework to study various distance problems of permutations, including the transposition and block-interchange distance of permutations as well as the reversal distance of signed permutations. These…
Agreement forests continue to play a central role in the comparison of phylogenetic trees since their introduction more than 25 years ago. More specifically, they are used to characterise several distances that are based on tree…
In this paper we consider the enumeration of ordered set partitions avoiding a permutation pattern of length 2 or 3. We provide an exact enumeration for avoiding the permutation 12. We also give exact enumeration for ordered partitions with…
Let $\mathcal{O}_n$ be the set of ordered labeled trees on ${0,...,n}$. A maximal decreasing subtree of an ordered labeled tree is defined by the maximal ordered subtree from the root with all edges being decreasing. In this paper, we study…
In this paper, the problem of pattern avoidance in generalized non-crossing trees is studied. The generating functions for generalized non-crossing trees avoiding patterns of length one and two are obtained. Lagrange inversion formula is…
We study the problem of counting alternating permutations avoiding collections of permutation patterns including 132. We construct a bijection between the set S_n(132) of 132-avoiding permutations and the set A_{2n + 1}(132) of alternating,…
The edit distance between two graphs on the same labeled vertex set is defined to be the size of the symmetric difference of the edge sets. The edit distance function of a hereditary property $\mathcal{H}$ is a function of $p\in [0,1]$ that…
We define a new family of generalized Stirling permutations that can be interpreted in terms of ordered trees and forests. We prove that the number of generalized Stirling permutations with a fixed number of ascents is given by a natural…
We define a bijection between triangulations of a convex polygon and $312$-avoiding permutations through the process of "ear-clipping". This bijection is then used to obtain a bijection between polygon dissections and a certain class of…
We propose the neural string edit distance model for string-pair matching and string transduction based on learnable string edit distance. We modify the original expectation-maximization learned edit distance algorithm into a differentiable…
A widely studied model for generating sequences is to ``evolve'' them on a tree according to a symmetric Markov process. We prove that model trees tend to be maximally ``far apart'' in terms of variational distance.
A well-known open problem in graph theory asks whether Stanley's chromatic symmetric function, a generalization of the chromatic polynomial of a graph, distinguishes between any two non-isomorphic trees. Previous work has proven the…
We introduce the set of (non-spanning) tree-decorated planar maps, and show that they are in bijection with the Cartesian product between the set of trees and the set of maps with a simple boundary. As a consequence, we count the number of…
Given a distance $D$ on a finite set $X$ with $n$ elements, it is interesting to understand how the ranking $R_x = z_1,z_2,\dots,z_n$ obtained by ordering the elements in $X$ according to increasing distance $D(x,z_i)$ from $x$, varies with…
The concept of $n$-distance was recently introduced to generalize the classical definition of distance to functions of $n$ arguments. In this paper we investigate this concept through a number of examples based on certain geometrical…