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Bone remodeling is a complex process involving cell-cell interactions, biochemical signaling and mechanical stimuli. Early models of the biological aspects of remodeling were non-spatial and focused on the local dynamics at a fixed location…
In this work we introduce a topological method for the search of fixed points and periodic points for continuous maps defined on generalized rectangles in finite dimensional Euclidean spaces. We name our technique "Stretching Along the…
A polynomial knot in $\mathbb{R}^n$ is a smooth embedding of $\mathbb{R}$ in $\mathbb{R}^n$ such that the component functions are real polynomials. In the earlier paper with Mishra, we have studied the space $\mathcal{P}$ of polynomial…
A paradigm that was successfully applied in the study of both pure and algorithmic problems in graph theory can be colloquially summarized as stating that "any graph is close to being the disjoint union of expanders". Our goal in this paper…
The Epstein deformation space parameterizes marked rational maps with prescribed combinatorial and dynamical structure. For the family of quadratic rational maps with a periodic critical cycle of order 4 and an extra critical point not…
Transitivity, the existence of periodic points and positive topological entropy can be used to characterize complexity in dynamical systems. It is known that for graphs that are not trees, for every $\varepsilon>0,$ there exist (complicate)…
The quantum statistics mechanism is very powerful for investigating the equilibrium states and the phase transitions in complex spin disorder systems. The spin disorder systems act as an interdisciplinary platform for solving the optimum…
We consider countable linear orders and study the quasi-order of convex embeddability and its induced equivalence relation. We obtain both combinatorial and descriptive set-theoretic results, and further extend our research to the case of…
We work with combinatorial maps to represent graph embeddings into surfaces up to isotopy. The surface in which the graph is embedded is left implicit in this approach. The constructions herein are proof-relevant and stated with a subset of…
Let $P$ be a set of $n$ points and $Q$ a convex $k$-gon in ${\mathbb R}^2$. We analyze in detail the topological (or discrete) changes in the structure of the Voronoi diagram and the Delaunay triangulation of $P$, under the convex distance…
In this thesis I present most of the results obtained during my PhD, where I worked on different subjects regarding jamming in systems of frictionless spheres. In particular, I focused on microscopic properties of jammed packings, such as…
In this work, we move beyond the traditional complex-valued representations, introducing more expressive hypercomplex representations to model entities and relations for knowledge graph embeddings. More specifically, quaternion embeddings,…
Entropy alone can self-assemble hard particles into colloidal crystals of remarkable complexity whose structures are the same as atomic and molecular crystals, but with larger lattice spacings. Although particle-based molecular simulation…
The goal of this book is to characterize algebraically the closed 4-manifolds that fibre nontrivially or admit geometries in the sense of Thurston, or which are obtained by surgery on 2-knots, and to provide a reference for the topology of…
We consider skew-products with concave interval fiber maps over a certain subshift obtained as the projection of orbits staying in a given region. It generates a new type of (essentially) coded shift. The fiber maps have expanding and…
We study a free quantum motion on periodically structured manifolds composed of elementary two-dimensional "cells" connected either by linear segments or through points where the two cells touch. The general theory is illustrated with…
We present two models for the space of knots which have endpoints at fixed boundary points in a manifold with boundary, one model defined as an inverse limit of spaces of maps between configuration spaces and another which is cosimplicial.…
In a previous work arXiv:physics/0611108v2, it was shown that the volume spanned by a molecular system in its conformational space can be effectively bounded by a polyhedral cone, this cone is described by means of a simple combinatorial…
Carbon nanotube Y-junctions are of great interest to the next generation of innovative multi-terminal nanodevices. Topological indices are graph-theoretically based parameters that describe various structural properties of a chemical…
We study the convexity of the entropy functional along particular interpolating curves defined on the space of finitely supported probability measures on a graph.