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We present a theoretical analysis of a simple model of the depinning of an anchored semiflexible polymer from a fixed planar substrate in (1+1) dimensions. We consider a polymer with a discrete sequence of pinning sites along its contour.…

Soft Condensed Matter · Physics 2009-11-07 Panayotis Benetatos , Erwin Frey

We establish a second-order almost sure limit theorem for the minimal position in a one-dimensional super-critical branching random walk, and also prove a martingale convergence theorem which answers a question of Biggins and Kyprianou [9].…

Probability · Mathematics 2009-06-22 Yueyun Hu , Zhan Shi

We consider a random walk in a random potential, which models a situation of a random polymer and we study the annealed and quenched costs to perform long crossings from a point to a hyperplane. These costs are measured by the so called…

Probability · Mathematics 2010-11-17 Nikos Zygouras

In this paper we investigate the conformation statistics of a Gaussian chain embedded in a medium of finite size, in the presence of quenched random obstacles. The similarities and differences between the case of random obstacles and the…

Disordered Systems and Neural Networks · Physics 2009-11-07 Yadin Y. Goldschmidt , Yohannes Shiferaw

We explore the effect of random permanent cross-links on a system of directed polymers confined between two planes with their end-points free to slide on them. We treat the cross-links as quenched disorder and we use a semimicroscopic…

Soft Condensed Matter · Physics 2010-02-22 Stephan Ulrich , Annette Zippelius , Panayotis Benetatos

In these lecture notes, which are based on the mini-course given at 2013 Prague School on Mathematical Statistical Physics, we discuss ballistic phase of quenched and annealed stretched polymers in random environment on ${\mathbb Z}^d$ with…

Probability · Mathematics 2014-12-02 Dmitry Ioffe

The inverse square potential arises in a variety of different quantum phenomena, yet notoriously it must be handled with care: it suffers from pathologies rooted in the mathematical foundations of quantum mechanics. We show that its…

Soft Condensed Matter · Physics 2015-06-15 Cristiano Nisoli , Alan. R. Bishop

Low-connectivity polymer networks were recently found to behave auxetically when subjected to small tensions, that is, their Poisson's ratio $\nu$ becomes negative. In addition, for specific state points, numerical simulations revealed that…

Soft Condensed Matter · Physics 2024-01-30 Andrea Ninarello , José Ruiz-Franco , Emanuela Zaccarelli

We investigate theoretically the effect of polymer tension on the collective behavior of reversibly binding cross-links. For this purpose, we employ a model of two weakly bending wormlike chains aligned in parallel by a tensile force, with…

Biological Physics · Physics 2015-02-10 Panayotis Benetatos , Alice von der Heydt , Annette Zippelius

We study the partition functions associated with non-intersecting polymers in a random environment. By considering paths in series and in parallel, the partition functions carry natural notions of subadditivity, allowing the effective study…

Probability · Mathematics 2021-03-30 Samuel G. G. Johnston , Neil O'Connell

We present the results of a computer simulation study of the melting scenario of two-dimensional soft-disk systems with potential $U(r)=\varepsilon(\sigma/r)^n$, $n=12$ and $n=1024$, both in the presence of random pinning and without it.…

Soft Condensed Matter · Physics 2019-10-02 E. A. Gaiduk , Yu. D. Fomin , E. N. Tsiok , V. N. Ryzhov

We investigate the kinetics of a polymer collapse due to the formation of irreversible crosslinks between its monomers. Using the contact probability $P(s)$ as a scale-dependent order parameter depending on the chemical distance $s$, our…

Soft Condensed Matter · Physics 2018-08-15 Vittore F. Scolari , Guillaume Mercy , Romain Koszul , Annick Lesne , Julien Mozziconacci

We study a class of micromanipulation experiments, exemplified by the pulling apart of the two strands of double-stranded DNA (dsDNA). When the pulling force is increased to a critical value, an ``unzipping'' transition occurs. For random…

Soft Condensed Matter · Physics 2009-10-31 David K. Lubensky , David R. Nelson

We introduce a growing one-dimensional quenched spin model that bases on asymmetrical one-side Ising interactions in the presence of external field. Numerical simulations and analytical calculations based on Markov chain theory show that…

Physics and Society · Physics 2014-05-13 Julian Sienkiewicz , Krzysztof Suchecki , Janusz A. Hołyst

It is argued that logarithmic factors multiplying power law behavior are to be expected at or near non-mean field critical points of systems with short-range interactions described theoretically by any kind of n -> 0 limit, in which the…

Statistical Mechanics · Physics 2007-05-23 John Cardy

The Langevin Equation for cooperative dynamics represents the dynamics of polymer melts with chains of increasing degree of polymerization, covering the full range of behavior from the unentangled to the entangled regime. This equation…

Soft Condensed Matter · Physics 2015-09-30 M. G. Guenza

Solutions of interacting linear polymers are mapped onto a system of ``soft'' spherical particles interacting via an effective pair potential. This coarse-graining reduces the individual monomer-level description to a problem involving only…

Soft Condensed Matter · Physics 2007-05-23 V. Krakoviack , J. P. Hansen , A. A. Louis

A relation between entanglement and criticality of spin chains is established. The entanglement we exploit is shared between auxiliary particles, which are isolated from each other, but are coupled to the same critical spin-1/2 chain. We…

Quantum Physics · Physics 2009-11-11 X. X. Yi , H. T. Cui , L. C. Wang

Biological polymers, such as intrinsically disordered proteins, play a central role in cellular biology, including mediating phase separation and controlling activity of biological condensates. The physical properties and functions of…

Applying a force to certain supramolecular bonds may initially stabilize them, manifested by a lower dissociation rate. We show that this behavior, known as catch bonding and by now broadly reported in numerous biophysics bonds, is…

Biological Physics · Physics 2018-04-11 Cyril Vrusch , Cornelis Storm