Related papers: Relaxation time of $L$-reversal chains and other c…
We prove a theorem that reduces bounding the mixing time of a card shuffle to verifying a condition that involves only pairs of cards, then we use it to obtain improved bounds for two previously studied models. E. Thorp introduced the…
We study Markov chains which model genome rearrangements. These models are useful for studying the equilibrium distribution of chromosomal lengths, and are used in methods for estimating genomic distances. The primary Markov chain studied…
In this paper, we propose a new Markov chain which generalizes random-to-random shuffling on permutations to random-to-random shuffling on linear extensions of a finite poset of size $n$. We conjecture that the second largest eigenvalue of…
We prove an $\widetilde O(n^2)$ bound for the relaxation time and the log-Sobolev time (inverse log-Sobolev constant) of the classical triangulation flip chain on a convex $(n+2)$-gon, implying a mixing time of $\widetilde O(n^2)$. The…
We extend a technique for lower-bounding the mixing time of card-shuffling Markov chains, and use it to bound the mixing time of the Rudvalis Markov chain, as well as two variants considered by Diaconis and Saloff-Coste. We show that in…
In the cyclic-to-random shuffle, we are given n cards arranged in a circle. At step k, we exchange the k'th card along the circle with a uniformly chosen random card. The problem of determining the mixing time of the cyclic-to-random…
We define the spectral gap of a Markov chain on a finite state space as the second-smallest singular value of the generator of the chain, generalizing the usual definition of spectral gap for reversible chains. We then define the relaxation…
We prove a theorem that reduces bounding the mixing time of a card shuffle to verifying a condition that involves only triplets of cards. Then we use it to analyze a classic model of card shuffling. In 1988, Diaconis introduced the…
The spectral gap $\gamma$ of a finite, ergodic, and reversible Markov chain is an important parameter measuring the asymptotic rate of convergence. In applications, the transition matrix $P$ may be unknown, yet one sample of the chain up to…
We show how to combine Fourier analysis with coupling arguments to bound the mixing times of a variety of Markov chains. The mixing time is the number of steps a Markov chain takes to approach its equilibrium distribution. One application…
A deck of $n$ cards are shuffled by repeatedly taking off the top card, flipping it with probability $1/2$, and inserting it back into the deck at a random position. This process can be considered as a Markov chain on the group $B_n$ of…
We investigate the mixing properties of a model of reversible Markov chains in random environment, which notably contains the simple random walk on the superposition of a deterministic graph and a second graph whose vertex set has been…
We obtain a tight bound of $O(L^2\log k)$ for the mixing time of the exclusion process in $\mathbf{Z}^d/L\mathbf{Z}^d$ with $k\leq{1/2}L^d$ particles. Previously the best bound, based on the log Sobolev constant determined by Yau, was not…
In 1937, biologists Sturtevant and Tan posed a computational question: transform a chromosome represented by a permutation of genes, into a second permutation, using a minimum-length sequence of reversals, each inverting the order of a…
When relaxation towards an equilibrium or steady state is exponential at large times, one usually considers that the associated relaxation time $\tau$, i.e., the inverse of that decay rate, is the longest characteristic time in the system.…
Since 1997 a considerable effort has been spent to study the mixing time of switch Markov chains on the realizations of graphic degree sequences of simple graphs. Several results were proved on rapidly mixing Markov chains on unconstrained,…
Consider the following Markov chain on permutations of length $n$. At each time step we choose a random position. If the letter at that position is smaller than the letter immediately to the left (cyclically) then these letters swap…
Given a signed permutation on $n$ elements, we need to sort it with the fewest reversals. This is a fundamental algorithmic problem motivated by applications in comparative genomics, as it allows to accurately model rearrangements in small…
The Random Resistor cum Tunneling Network (RRTN) model was proposed from our group by considering an extra phenomenological (semi-classical) tunneling process into a classical RRN bond percolation model. We earlier reported about…
In this paper, we revisit one-channel time reversal (TR) experiments through multiple scattering media in the framework of the self-consistent multiple scattering theory. The hyper resolution and the self-averaging property are retrieved.…