Related papers: From tangle fractions to DNA
We will strengthen the known upper and lower bounds on the delta-crossing number of knots in therms of the triple-crossing number. The latter bound turns out to be strong enough to obtain (unknown values of) triple-crossing numbers for a…
Dual graphs have been applied to model RNA secondary structures with pseudoknots, or intertwined base pairs. In previous works, a linear-time algorithm was introduced to partition dual graphs into maximally connected components called…
Site-specific recombination on supercoiled circular DNA molecules can yield a variety of knots and catenanes. Twist knots are some of the most common conformations of these products and they can act as substrates for further rounds of…
We describe rational knots with any of the possible combinations of the properties (a)chirality, (non-)positivity, (non-)fiberedness, and unknotting number one (or higher), and determine exactly their number for a given number of crossings…
This expository paper describes how the knot invariant Fox coloring can be applied to tangles.
The notion of a pseudoknot is defined as an equivalence class of knot diagrams that may be missing some crossing information. We provide here a topological invariant schema for pseudoknots and their relatives, 4-valent rigid vertex spatial…
In Classical Knot Theory and in the new Theory of Quantum Invariants substantial effort was directed toward the search for unknotting moves on links. We solve, in this note, several classical problems concerning unknotting moves. Our…
DNA strings and their properties are widely studied since last 20 years due to its applications in DNA computing. In this area, one designs a set of DNA strings (called DNA code) which satisfies certain thermodynamic and combinatorial…
This paper builds a novel bridge between algebraic coding theory and mathematical knot theory, with applications in both directions. We give methods to construct error-correcting codes starting from the colorings of a knot, describing…
The study of knots and links from a probabilistic viewpoint provides insight into the behavior of "typical" knots, and opens avenues for new constructions of knots and other topological objects with interesting properties. The knotting of…
In this paper we introduce a variation on the multidimensional segment tree, formed by unifying different interpretations of the dimensionalities of the data structure. We give some new definitions to previously well-defined concepts that…
Knots are fascinating topological structures that have been observed in various contexts, ranging from micro-worlds to macro-systems, and are conjectured to play a fundamental role in their respective fields. In order to characterize their…
Tangles of graphs have been introduced by Robertson and Seymour in the context of their graph minor theory. Tangles may be viewed as describing "k-connected components" of a graph (though in a twisted way). They play an important role in…
We make use of the 3D nature of knots and links to find savings in computational complexity when computing knot invariants such as the linking number and, in general, most finite type invariants. These savings are achieved in comparison…
This paper presents a self-contained new theory of weak fractional differential calculus in one-dimension. The crux of this new theory is the introduction of a weak fractional derivative notion which is a natural generalization of integer…
I present a summary of the recent progress made in field and string theory which has led to a reformulation of quantum-group polynomial invariants for knots and links into new polynomial invariants whose coefficients can be described in…
This paper is a survey of knot theory and invariants of knots and links from the point of view of categories of diagrams. The topics range from foundations of knot theory to virtual knot theory and topological quantum field theory.
We apply a recent duality theorem for tangles in abstract separation systems to derive tangle-type duality theorems for width-parameters in graphs and matroids. We further derive a duality theorem for the existence of clusters in large data…
Since its introduction in 2012, the factorization theory for rational motions quickly evolved and found applications in theoretical and applied mechanism science. We provide an accessible introduction to motion factorization with many…
We investigate to what extent renormalization can be understood as an algebraic manipulation on concatenated one-loop integrals. We find that the resulting algebra indicates a useful connection to knot theory as well as number theory and…