English
Related papers

Related papers: The Bergman complex of a matroid and phylogenetic …

200 papers

In this paper, first steps are taken towards characterising lattices of cyclic flats $\mathcal{Z}(M)$ that belong to matroids $M$ that can be represented over a prescribed finite field $\mathbb{F}_q$. Two natural maps from $\mathcal{Z}(M)$…

Combinatorics · Mathematics 2019-06-27 Ragnar Freij-Hollanti , Matthias Grezet , Camilla Hollanti , Thomas Westerbäck

A matroid base polytope is a polytope in which each vertex has 0,1 coordinates and each edge is parallel to a difference of two coordinate vectors. Matroid base polytopes are described combinatorially by integral submodular functions on a…

Combinatorics · Mathematics 2025-11-19 Jonah Berggren , Jeremy L. Martin , José A. Samper

We study the monodromies and the limit mixed Hodge structures of families of complete intersection varieties over a punctured disk in the complex plane. For this purpose, we express their motivic nearby fibers in terms of the geometric data…

Algebraic Geometry · Mathematics 2021-03-11 Takahiro Saito , Kiyoshi Takeuchi

We study a class of combinatorial objects that we call "decorated trees". These consist of vertices, arrows and edges, where each edge is decorated by two integers (one near each of its endpoints), each arrow is decorated by an integer, and…

Algebraic Geometry · Mathematics 2024-10-08 Pierrette Cassou-Noguès , Daniel Daigle

We study the perfect matching lattice of a matching covered graph $G$, generated by the incidence vectors of its perfect matchings. Building on results of Lov\'asz and de Carvalho, Lucchesi, and Murty, we give a polynomial-time algorithm…

Combinatorics · Mathematics 2025-11-07 Olha Silina

We generalize Baker-Bowler's theory of matroids over tracts to orthogonal matroids, define orthogonal matroids with coefficients in tracts in terms of Wick functions, orthogonal signatures, circuit sets, and orthogonal vector sets, and…

Combinatorics · Mathematics 2025-08-13 Tong Jin , Donggyu Kim

Cotransversal matroids are a family of matroids that arise from planted graphs. We prove that two planted graphs give the same cotransversal matroid if and only if they can be obtained from each other by a series of local moves.

Combinatorics · Mathematics 2010-02-21 Federico Ardila , Amanda Ruiz

In this paper we apply new geometric and combinatorial methods to the study of phylogenetic mixtures. The focus of the geometric approach is to describe the geometry of phylogenetic mixture distributions for the two state random cluster…

Populations and Evolution · Quantitative Biology 2007-11-08 Frederick A. Matsen , Elchanan Mossel , Mike Steel

In a previous work, we gave a construction of (not necessarily realizable) oriented matroids from a triangulation of a product of two simplices. In this follow-up paper, we use a variant of Viro's patchworking to derive a topological…

Combinatorics · Mathematics 2020-10-26 Marcel Celaya , Georg Loho , Chi Ho Yuen

The (tree) amplituhedron A(n,k,m) is the image in the Grassmannian Gr(k,k+m) of the totally nonnegative part of Gr(k,n), under a (map induced by a) linear map which is totally positive. It was introduced by Arkani-Hamed and Trnka in 2013 in…

Combinatorics · Mathematics 2021-06-10 Steven N. Karp , Lauren K. Williams

A frame matroid M is graphic if there is a graph G with cycle matroid isomorphic to M. In general, if there is one such graph, there will be many. Zaslavsky has shown that frame matroids are precisely those having a representation as a…

Combinatorics · Mathematics 2014-04-01 Rong Chen , Matt DeVos , Daryl Funk , Irene Pivotto

We consider spaces of plane curves in the setting of algebraic geometry and of singularity theory. On one hand there are the complete linear systems, on the other we consider unfolding spaces of bivariate polynomials of Brieskorn-Pham type.…

Algebraic Geometry · Mathematics 2010-07-08 Michael Lönne

We introduce the singular cohomology ring of a matroid which extends the Chow ring of a matroid. This is defined as the singular cohomology ring of a certain quasi-projective toric variety associated to the matroid. Using the matroidal…

Combinatorics · Mathematics 2026-03-20 Kyle Binder

Given a pure, full-dimensional, locally strongly connected polyhedral complex C with convex support, we characterize, by a local codimension-2 condition, polyhedral complexes that coarsen C. The proof of the characterization draws upon a…

Combinatorics · Mathematics 2026-05-15 Nathan Reading

The associahedron is a polytope whose graph is the graph of flips on triangulations of a convex polygon. Pseudotriangulations and multitriangulations generalize triangulations in two different ways, which have been unified by Pilaud and…

Combinatorics · Mathematics 2013-10-29 Vincent Pilaud , Francisco Santos

A skew polynomial ring $R=K[x;\sigma,\delta]$ is a ring of polynomials with non-commutative multiplication. This creates a difference between left and right divisibility, and thus a concept of left and right evaluations and roots. A…

Rings and Algebras · Mathematics 2018-08-17 Travis Baumbaugh , Felice Manganiello

Given an undirected planar graph G with n vertices and a set S of n points inside a simple polygon P, a point-set embedding of G on S is a planar drawing of G such that each vertex is mapped to a distinct point of S and the edges are…

Computational Geometry · Computer Science 2013-10-22 Fatemeh Rajabi-Alni , Alireza Bagheri

We construct a cochain map embedding the cohomology complex of any dual Leibniz algebra $B$ into the Lie algebra cochain complex of $\mathfrak{g} \otimes B$, where $\mathfrak{g}$ is a Leibniz algebra. This reduces the study of dual Leibniz…

Rings and Algebras · Mathematics 2025-12-23 Hassan Alhussein

Geometric embedding of graphs in a point set in the plane is a well known problem. In this paper, the complexity of a variant of this problem, where the point set is bounded by a simple polygon, is considered. Given a point set in the plane…

Computational Geometry · Computer Science 2009-08-28 Alireza Bagheri , Mohammadreza Razzazi

We express the matroid polytope $P_M$ of a matroid $M$ as a signed Minkowski sum of simplices, and obtain a formula for the volume of $P_M$. This gives a combinatorial expression for the degree of an arbitrary torus orbit closure in the…

Combinatorics · Mathematics 2013-01-17 Federico Ardila , Carolina Benedetti , Jeffrey Doker