English
Related papers

Related papers: Markov bases of binary graph models

200 papers

Large continuous-time Markov chains with exponentially small transition rates arise in modeling complex systems in physics, chemistry and biology. We propose a constructive graph-algorithmic approach to determine the sequence of critical…

Probability · Mathematics 2017-02-01 Tingyue Gan , Maria Cameron

We give a bound for the graph energy with given maximal degree in terms of the second and fourth moments of a graph. In the case in which the graph is $d$-regular we obtain the bound that is given in Van Dam, E. et al. (2014). through…

Combinatorics · Mathematics 2021-03-01 Octavio Arizmendi , Jorge Fernandez Hidalgo

We introduce a very general model of an inhomogenous random graph with independence between the edges, which scales so that the number of edges is linear in the number of vertices. This scaling corresponds to the p=c/n scaling for G(n,p)…

Probability · Mathematics 2011-11-10 Bela Bollobas , Svante Janson , Oliver Riordan

We study the effect of topology variation on the dynamic behavior of a system with local update rules. We implement one-dimensional binary cellular automata on graphs with various topologies by formulating two sets of degree-dependent…

Statistical Mechanics · Physics 2009-11-11 Carsten Marr , Marc-Thorsten Huett

Given an undirected $n$-vertex graph $G(V,E)$ and an integer $k$, let $T_k(G)$ denote the random vertex induced subgraph of $G$ generated by ordering $V$ according to a random permutation $\pi$ and including in $T_k(G)$ those vertices with…

Discrete Mathematics · Computer Science 2018-01-29 Uriel Feige , Jonathan Hermon , Daniel Reichman

We determine an explicit Gr\"obner basis, consisting of linear forms and determinantal quadrics, for the prime ideal of Raftery's mixture transition distribution model for Markov chains. When the states are binary, the corresponding…

Statistics Theory · Mathematics 2012-07-10 Bernd Sturmfels

The degree-based entropy of a graph is defined as the Shannon entropy based on the information functional that associates the vertices of the graph with the corresponding degrees. In this paper, we study extremal problems of finding the…

Combinatorics · Mathematics 2021-09-01 Yanni Dong , Maximilien Gadouleau , Pengfei Wan , Shenggui Zhang

We deal with a random graph model where at each step, a vertex is chosen uniformly at random, and it is either duplicated or its edges are deleted. Duplication has a given probability. We analyse the limit distribution of the degree of a…

Probability · Mathematics 2014-09-19 Ágnes Backhausz , Tamás F. Móri

Let $d_G(v)$ be the degree of the vertex $v$ in a graph $G$. The Sombor index of $G$ is defined as $SO(G) =\sum_{uv\in E(G)}\sqrt{d^2_G(u)+d^2_G(v)}$, which is a new degree-based topological index introduced by Gutman. Let…

Combinatorics · Mathematics 2021-03-16 Ting Zhou , Zhen Lin , Lianying Miao

It is possible to represent each of a number of Markov chains as an evolving sequence of connected subsets of a directed acyclic graph that grow in the following way: initially, all vertices of the graph are unoccupied, particles are fed in…

Probability · Mathematics 2015-03-17 Steven N. Evans , Rudolf Gruebel , Anton Wakolbinger

We analyze the existence and the size of the giant component in the stationary state of a Markovian model for bipartite multigraphs, in which the movement of the edge ends on one set of vertices of the bipartite graph is a zero-range…

Statistical Mechanics · Physics 2007-05-23 Otto Pulkkinen , Juha Merikoski

We study a very general four dimensional Field Theory model describing the dynamics of a massless higher spin $N$ symmetric tensor field particle interacting with a geometrical background.This model is invariant under the action of an…

High Energy Physics - Theory · Physics 2015-06-11 Giuseppe Bandelloni

We present a graph model for a background independent, relational approach to spacetime emergence. The general idea and the graph main features, detailed in [1], are discussed. This is a combinatorial (dynamical) metric graph, colored on…

General Relativity and Quantum Cosmology · Physics 2020-07-14 D. Pugliese

An edge switch is an operation which makes a local change in a graph while maintaining the degree of every vertex. We introduce a switch move, called a triangle switch, which creates or deletes at least one triangle. Specifically, a make…

Discrete Mathematics · Computer Science 2019-05-14 Colin Cooper , Martin Dyer , Catherine Greenhill

In a graph, $k$ cycles are {\em admissible} if their lengths form an arithmetic progression with common difference one or two. Let $G$ be a 2-connected graph with minimum degree at least $k\geqslant 4$. We prove that \begin{itemize} \item…

Combinatorics · Mathematics 2025-11-06 Yandong Bai , Andrzej Grzesik , Binlong Li , Magdalena Prorok

We show how to exploit symmetries of a graph to efficiently compute the fastest mixing Markov chain on the graph (i.e., find the transition probabilities on the edges to minimize the second-largest eigenvalue modulus of the transition…

Probability · Mathematics 2009-06-17 Stephen Boyd , Persi Diaconis , Pablo A. Parrilo , Lin Xiao

Graphical models with heavy-tailed factors can be used to model extremal dependence or causality between extreme events. In a Bayesian network, variables are recursively defined in terms of their parents according to a directed acyclic…

Methodology · Statistics 2026-01-14 Johan Segers , Stefka Asenova

We define and study the statistical models in exponential family form whose sufficient statistics are the degree distributions and the bi-degree distributions of undirected labelled simple graphs. Graphs that are constrained by the joint…

Statistics Theory · Mathematics 2014-11-17 Kayvan Sadeghi , Alessandro Rinaldo

The problem of efficiently sampling from a set of(undirected) graphs with a given degree sequence has many applications. One approach to this problem uses a simple Markov chain, which we call the switch chain, to perform the sampling. The…

Data Structures and Algorithms · Computer Science 2014-12-18 Catherine Greenhill

Various kinds of spread of influence occur in real world social and virtual networks. These phenomena are formulated by activation processes and irreversible dynamic monopolies in combinatorial graphs representing the topology of the…

Discrete Mathematics · Computer Science 2024-03-05 Manouchehr Zaker