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The diversity of neuron models used in contemporary theoretical neuroscience to investigate specific properties of covariances raises the question how these models relate to each other. In particular it is hard to distinguish between…

Neurons and Cognition · Quantitative Biology 2022-05-17 Dmytro Grytskyy , Tom Tetzlaff , Markus Diesmann , Moritz Helias

We present a detailed study on the mean first-passage time of volatility processes. We analyze the theoretical expressions based on the most common stochastic volatility models along with empirical results extracted from daily data of major…

Physics and Society · Physics 2008-12-02 Jaume Masoliver , Josep Perello

Reaction-Diffusion systems arise in diverse areas of science and engineering. Due to the peculiar characteristics of such equations, analytic solutions are usually not available and numerical methods are the main tools for approximating the…

Numerical Analysis · Mathematics 2024-09-16 Eddel Elí Ojeda Avilés , Jae-Hun Jung , Daniel Olmos Liceaga

Starting from full-dimensional models of solute transport, we derive and analyze multi-dimensional models of time-dependent convection, diffusion, and exchange in and around pulsating vascular and perivascular networks. These models are…

Analysis of PDEs · Mathematics 2023-04-03 Rami Masri , Marius Zeinhofer , Miroslav Kuchta , Marie E. Rognes

Extracting time-varying latent variables from computational cognitive models is a key step in model-based neural analysis, which aims to understand the neural correlates of cognitive processes. However, existing methods only allow…

Machine Learning · Computer Science 2025-09-01 Ti-Fen Pan , Jing-Jing Li , Bill Thompson , Anne Collins

Mathematical modelling of the macroscopic electrical activity of the brain is highly non-trivial and requires a detailed understanding of not only the associated mathematical techniques, but also the underlying physiology and anatomy.…

Neurons and Cognition · Quantitative Biology 2023-06-22 Blake J. Cook , Andre D. H. Peterson , Wessel Woldman , John R. Terry

In this work, we introduce a novel computational framework that we developed to use numerical simulations to investigate the complexity of brain tissue at a microscopic level with a detail never realised before. Directly inspired by the…

Medical Physics · Physics 2018-06-20 Marco Palombo , Daniel C. Alexander , Hui Zhang

The analyses presented herein demonstrate that neuronal electrical activity can be consistently interpreted as a manifestation of murburn redox-mediated electronic dynamics rather than as a process fundamentally driven by transmembrane…

Neurons and Cognition · Quantitative Biology 2026-05-04 Kelath Murali Manoj , Nagamani Sukumar

Advanced inference techniques allow one to reconstruct the pattern of interaction from high dimensional data sets. We focus here on the statistical properties of inferred models and argue that inference procedures are likely to yield models…

Data Analysis, Statistics and Probability · Physics 2013-10-09 Iacopo Mastromatteo , Matteo Marsili

We introduce a novel recurrent neural network (RNN) approach to account for temporal dynamics and dependencies in brain networks observed via functional magnetic resonance imaging (fMRI). Our approach directly parameterizes temporal…

Neural and Evolutionary Computing · Computer Science 2018-08-28 R Devon Hjelm , Eswar Damaraju , Kyunghyun Cho , Helmut Laufs , Sergey M. Plis , Vince Calhoun

Stochastic transport due to a velocity field modeled by the superposition of small-scale divergence free vector fields activated by Fractional Gaussian Noises (FGN) is numerically investigated. We present two non-trivial contributions: the…

Statistical Mechanics · Physics 2025-06-12 Paolo Cifani , Franco Flandoli

For constructing neuronal network models computational neuroscientists have access to wide-ranging anatomical data that nevertheless tend to cover only a fraction of the parameters to be determined. Finding and interpreting the most…

This paper proposes a novel framework for recurrent neural networks (RNNs) inspired by the human memory models in the field of cognitive neuroscience to enhance information processing and transmission between adjacent RNNs' units. The…

Neural and Evolutionary Computing · Computer Science 2018-06-05 Xi Chen , Zhihong Deng , Gehui Shen , Ting Huang

Generative models such as denoising diffusion models are quickly advancing their ability to approximate highly complex data distributions. They are also increasingly leveraged in scientific machine learning, where samples from the implied…

Machine Learning · Computer Science 2025-03-14 Jan-Hendrik Bastek , WaiChing Sun , Dennis M. Kochmann

Time reflection and refraction are temporal analogies of the spatial boundary effects derived from Fermat's principle. They occur when classical waves strike a time boundary where an abrupt change in the properties of the medium is…

Quantum Gases · Physics 2023-09-20 Zhaoli Dong , Hang Li , Tuo Wan , Qian Liang , Zhaoju Yang , Bo Yan

We introduce and study a class of probabilistic generative models, where the latent object is a finite-dimensional diffusion process on a finite time interval and the observed variable is drawn conditionally on the terminal point of the…

Probability · Mathematics 2019-06-03 Belinda Tzen , Maxim Raginsky

Micro-segmentation of customers in the finance sector is a non-trivial task and has been an atypical omission from recent scientific literature. Where traditional segmentation classifies customers based on coarse features such as…

Machine Learning · Computer Science 2021-12-13 Charl Maree , Christian W. Omlin

We observe that the standard log likelihood training objective for a Recurrent Neural Network (RNN) model of time series data is equivalent to a variational Bayesian training objective, given the proper choice of generative and inference…

Machine Learning · Computer Science 2016-06-21 Jascha Sohl-Dickstein , Diederik P. Kingma

This tutorial provides an in-depth guide on inference-time guidance and alignment methods for optimizing downstream reward functions in diffusion models. While diffusion models are renowned for their generative modeling capabilities,…

Artificial Intelligence · Computer Science 2025-01-22 Masatoshi Uehara , Yulai Zhao , Chenyu Wang , Xiner Li , Aviv Regev , Sergey Levine , Tommaso Biancalani

We propose the use of recurrent neural networks for classifying phases of matter based on the dynamics of experimentally accessible observables. We demonstrate this approach by training recurrent networks on the magnetization traces of two…

Disordered Systems and Neural Networks · Physics 2018-08-22 Evert van Nieuwenburg , Eyal Bairey , Gil Refael