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While extensive research has been conducted on chaos emerging from a dynamical system's temporal dynamics, our research examines extreme sensitivity to initial conditions in discrete-time dynamical systems from a geometrical perspective.…

Chaotic Dynamics · Physics 2024-12-04 Brandon B. Le , Nivika A. Gandhi

Self-organized network dynamics prevails for systems across physics, biology and engineering. How external signals generate distributed responses in networked systems fundamentally underlies their function, yet is far from fully understood.…

Adaptation and Self-Organizing Systems · Physics 2019-08-05 Xiaozhu Zhang , Sarah Hallerberg , Moritz Matthiae , Dirk Witthaut , Marc Timme

Networked dynamical systems, i.e., systems of dynamical units coupled via nontrivial interaction topologies, constitute models of broad classes of complex systems, ranging from gene regulatory and metabolic circuits in our cells to…

Adaptation and Self-Organizing Systems · Physics 2024-03-12 Xiaozhu Zhang , Marc Timme

Despite the fact that the phenomenon of bursting activity is important for functioning of living neural networks, the mechanisms of its origin are still not clear. In this paper, we propose a new phenomenological model that can explain the…

Neurons and Cognition · Quantitative Biology 2023-03-01 Nikita Barabash , Tatiana Levanova , Sergey Stasenko

Cortical activity in-vivo displays relaxational time scales much longer than the membrane time constant of the neurons or the deactivation time of ionotropic synaptic conductances. The mechanisms responsible for such slow dynamics are not…

Disordered Systems and Neural Networks · Physics 2025-08-07 Ferdinand Tixidre , Gianluigi Mongillo , Alessandro Torcini

Rhythm is a fundamental aspect of human behaviour, present from infancy and deeply embedded in cultural practices. Rhythm anticipation is a spontaneous cognitive process that typically occurs before the onset of actual beats. While most…

Neurons and Cognition · Quantitative Biology 2025-03-18 Zhongju Yuan , Geraint Wiggins , Dick Botteldooren

Oscillators coupled in a network can synchronize with each other to yield a coherent population rhythm. If multiple such networks are coupled together, the question arises whether these rhythms will synchronize. We investigate the impact of…

Adaptation and Self-Organizing Systems · Physics 2016-12-22 John Hongyu Meng , Hermann Riecke

Networks of the brain are composed of a very large number of neurons connected through a random graph and interacting after random delays that both depend on the anatomical distance between cells. In order to comprehend the role of these…

Mathematical Physics · Physics 2014-05-16 Cristobal Quininao , Jonathan Touboul

The study of synchronization in biological systems is essential for the understanding of the rhythmic phenomena of living organisms at both molecular and cellular levels. In this paper, by using simple dynamical systems theory, we present a…

Molecular Networks · Quantitative Biology 2007-05-23 Chunguang Li , Luonan Chen , Kazuyuki Aihara

When neural networks are trained from data to simulate the dynamics of physical systems, they encounter a persistent challenge: the long-time dynamics they produce are often unphysical or unstable. We analyze the origin of such…

Machine Learning · Computer Science 2024-06-21 Daniel Floryan

Dynamic networks are used in a wide range of fields, including social network analysis, recommender systems, and epidemiology. Representing complex networks as structures changing over time allow network models to leverage not only…

Social and Information Networks · Computer Science 2021-06-15 Joakim Skarding , Bogdan Gabrys , Katarzyna Musial

The last decade has witnessed a surge of theoretical and computational models to describe the dynamics of complex gene regulatory networks, and how these interactions can give rise to multistable and heterogeneous cell populations. As the…

Molecular Networks · Quantitative Biology 2023-06-28 Federico Bocci , Dongya Jia , Qing Nie , Mohit Kumar Jolly , Jose Onuchic

Brains have evolved diverse neurons with varying morphologies and dynamics that impact temporal information processing. In contrast, most neural network models use homogeneous units that vary only in spatial parameters (weights and biases).…

Neural and Evolutionary Computing · Computer Science 2025-01-14 Karim G. Habashy , Benjamin D. Evans , Dan F. M. Goodman , Jeffrey S. Bowers

What is the reason for complex dynamical patterns registered from real biological neuronal networks? Noise and dynamical reconfiguring of a network (functional/dynamic connectome) were proposed as possible answers. In this case study, we…

Neurons and Cognition · Quantitative Biology 2023-06-16 A. Vidybida , O. Shchur

Understanding the mechanisms of interactions within cells, tissues, and organisms is crucial to driving developments across biology and medicine. Mathematical modeling is an essential tool for simulating biological systems and revealing…

Molecular Networks · Quantitative Biology 2024-08-13 Lingxia Qiao , Ali Khalilimeybodi , Nathaniel J Linden-Santangeli , Padmini Rangamani

We all are fascinated by the phenomena of intelligent behavior, as generated both by our own brains and by the brains of other animals. As physicists we would like to understand if there are some general principles that govern the structure…

Biological Physics · Physics 2007-05-23 William Bialek

The theory of mixed-feedback systems provides an effective framework for the design of robust and tunable oscillations in nonlinear systems characterized by interleaved fast positive and slow negative feedback loops. The goal of this paper…

Dynamical Systems · Mathematics 2024-12-11 Omar Juarez-Alvarez , Alessio Franci

In this manuscript, a silent resonator neuron is coupled with a spiking integrator neuron through the gap junction, when the coupled neurons are of different types of excitability and none of the coupled neurons exhibit mixed mode…

Dynamical Systems · Mathematics 2024-01-18 Mohammad Reza Razvan , Somaye Yasaman

This essay, derived from a lecture at "The Physics Modeling of Thought" workshop in Berlin in winter 2023, explores the mutually beneficial relationship between theoretical neuroscience and statistical physics through the lens of efficient…

Neurons and Cognition · Quantitative Biology 2024-08-06 Jonathan Kadmon

Many biological phenomena such as locomotion, circadian cycles, and breathing are rhythmic in nature and can be modeled as rhythmic dynamical systems. Dynamical systems modeling often involves neglecting certain characteristics of a…

Dynamical Systems · Mathematics 2016-01-20 M. Mert Ankaralı , Shahin Sefati , Manu S. Madhav , Andrew Long , Amy J. Bastian , Noah J. Cowan