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We introduce regular languages of morphisms in free monoidal categories, with their associated grammars and automata. These subsume the classical theory of regular languages of words and trees, but also open up a much wider class of…
This is a largely expository paper in which we discuss various sets having a Catalan number of objects and some well-known bijections between these sets presented in a new and hopefully interesting way. We call these concepts "bookshelf"…
Multiplier bimonoids (or bialgebras) in arbitrary braided monoidal categories are defined. They are shown to possess monoidal categories of comodules and modules. These facts are explained by the structures carried by their induced…
We present an abstract unifying framework for interpreting Stone-type dualities; several known dualities are seen to be instances of just one topos-theoretic phenomenon, and new dualities are introduced. In fact, infinitely many new…
The combinatorics of RNA plays a central role in biology. Mathematical biologists have several commonly-used models for RNA: words in a fixed alphabet (representing the primary sequence of nucleotides) and plane trees (representing the…
We show how the framework of crossed simplicial groups may be used to provide a classification of topological field theories on open cobordism categories defined by reductions of the structure group to a planar Lie group. Such theories are…
We construct a finitary additive 2-category whose Grothendieck ring is isomorphic to the semigroup algebra of the monoid of order-decreasing and order-preserving transformations of a finite chain.
We introduce a new algebraic construction, {\em monop}, that combines monoids (with respect to the product of species), and operads (monoids with respect to the substitution of species) in the same algebraic structure. By the use of…
We introduce a graph polynomial that distinguishes tree structures to represent dependency grammar and a measure based on the polynomial representation to quantify syntax similarity. The polynomial encodes accurate and comprehensive…
The original motivation for study for hook length polynomials was to find a combinatorial proof for a hook length formula for binary trees given by Postnikov, as well as a proof for a hook length polynomial formula conjectured by Lascoux.…
We show that two constructions yield equivalent braided monoidal categories. The first is topological, based on Legendrian tangles and skein relations, while the second is algebraic, in terms of chain complexes with complete flag and…
In this paper we investigate undirected discrete graphical tree models when all the variables in the system are binary, where leaves represent the observable variables and where all the inner nodes are unobserved. A novel approach based on…
We consider finite trees with edges labeled by letters on a finite alphabet $\varSigma$. Each pair of nodes defines a unique labeled path whose trace is a word of the free monoid $\varSigma^*$. The set of all such words defines the language…
We study categorical models for the unitless fragment of multiplicative linear logic. We find that the appropriate notion of model is a special kind of promonoidal category. Since the theory of promonoidal categories has not been developed…
We show how the categorial approach to inverse monoids can be described as a certain endofunctor (which we call the partialization functor) of some category. In this paper we show that this functor can be used to obtain several recently…
Monoidal width was recently introduced by the authors as a measure of the complexity of decomposing morphisms in monoidal categories. We have shown that in a monoidal category of cospans of graphs, monoidal width and its variants can be…
We construct symmetric monoidal categories $\LRF, \FD$ of rooted forests and Feynman graphs. These categories closely resemble finitary abelian categories, and in particular, the notion of Ringel-Hall algebra applies. The Ringel-Hall Hopf…
We provide a short combinatorial proof of Cayley's formula by means of a bijective map to an outcome space of an urn-drawing problem. Furthermore we introduce an algebraic structure on the set of labeled trees, which provides a more…
This paper introduces a series of methods for traversing binary decision trees using arithmetic operations. We present a suite of binary tree traversal algorithms that leverage novel representation matrices to flatten the full binary tree…
We define a far-reaching generalization of Schnyder woods which encompasses many classical combinatorial structures on planar graphs. Schnyder woods are defined for planar triangulations as certain triples of spanning trees covering the…