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Recurrent neural networks (RNNs) are brain-inspired models widely used in machine learning for analyzing sequential data. The present work is a contribution towards a deeper understanding of how RNNs process input signals using the response…

Machine Learning · Statistics 2021-02-15 Soon Hoe Lim

We introduce a growing network model in which a new node attaches to a randomly-selected node, as well as to all ancestors of the target node. This mechanism produces a sparse, ultra-small network where the average node degree grows…

Statistical Mechanics · Physics 2009-11-10 P. L. Krapivsky , S. Redner

Recurrent neural networks (RNNs) are capable of learning features and long term dependencies from sequential and time-series data. The RNNs have a stack of non-linear units where at least one connection between units forms a directed cycle.…

Neural and Evolutionary Computing · Computer Science 2018-02-26 Hojjat Salehinejad , Sharan Sankar , Joseph Barfett , Errol Colak , Shahrokh Valaee

Network embedding is a very important method for network data. However, most of the algorithms can only deal with static networks. In this paper, we propose an algorithm Recurrent Neural Network Embedding (RNNE) to deal with dynamic…

Machine Learning · Computer Science 2020-07-01 Haiwei Huang , Jinlong Li , Huimin He , Huanhuan Chen

This paper explores the intricate behavior of deep neural networks (DNNs) through the lens of neuron activation dynamics. We propose a probabilistic framework that can analyze models' neuron activation patterns as a stochastic process,…

Artificial Intelligence · Computer Science 2024-12-25 Yizhou Zhang , Yang Sui

It was recently shown how graphs can be used to provide descriptions of psychopathologies, where symptoms of, say, depression, affect each other and certain configurations determine whether someone could fall into a sudden depression. To…

Applications · Statistics 2017-04-21 Lourens J. Waldorp , Jolanda J. Kossakowski

Recurrent Neural Networks (RNNs) have found widespread applications in machine learning for time series prediction and dynamical systems reconstruction, and experienced a recent renaissance with improved training algorithms and…

Machine Learning · Computer Science 2026-04-14 Lukas Eisenmann , Alena Brändle , Zahra Monfared , Daniel Durstewitz

Machine learning algorithms relying on deep neural networks recently allowed a great leap forward in artificial intelligence. Despite the popularity of their applications, the efficiency of these algorithms remains largely unexplained from…

Disordered Systems and Neural Networks · Physics 2020-03-24 Marylou Gabrié

Random walks constitute a fundamental mechanism for a large set of dynamics taking place on networks. In this article, we study random walks on weighted networks with an arbitrary degree distribution, where the weight of an edge between two…

Statistical Mechanics · Physics 2013-01-17 Zhongzhi Zhang , Tong Shan , Guanrong Chen

Countless learning tasks require dealing with sequential data. Image captioning, speech synthesis, and music generation all require that a model produce outputs that are sequences. In other domains, such as time series prediction, video…

Machine Learning · Computer Science 2015-10-20 Zachary C. Lipton , John Berkowitz , Charles Elkan

Many real-world phenomena can be modelled as dynamical processes on networks, a prominent example being the spread of infectious diseases such as COVID-19. Mean-field approximations are a widely used tool to analyse such dynamical processes…

Probability · Mathematics 2025-08-25 Jonathan A. Ward , Gábor Timár , Péter L. Simon

Recurrence networks are powerful tools used effectively in the nonlinear analysis of time series data. The analysis in this context is done mostly with unweighted and undirected complex networks constructed with specific criteria from the…

Chaotic Dynamics · Physics 2017-09-18 Rinku Jacob , K. P. Harikrishnan , R. Misra , G. Ambika

Directed acyclic graphs are a fundamental class of networks that includes citation networks, food webs, and family trees, among others. Here we define a random graph model for directed acyclic graphs and give solutions for a number of the…

Physics and Society · Physics 2009-03-23 Brian Karrer , M. E. J. Newman

In a manner similar to the molecular chaos that underlies the stable thermodynamics of gases, neuronal system may exhibit microscopic instability in individual neuronal dynamics while a macroscopic order of the entire population possibly…

Neurons and Cognition · Quantitative Biology 2015-06-23 Yuzuru Yamanaka , Shun-ichi Amari , Shigeru Shinomoto

We study random graph models for directed acyclic graphs, an important class of networks that includes citation networks, food webs, and feed-forward neural networks among others. We propose two specific models, roughly analogous to the…

Physics and Society · Physics 2009-10-16 Brian Karrer , M. E. J. Newman

Advancements in artificial intelligence call for a deeper understanding of the fundamental mechanisms underlying deep learning. In this work, we propose a theoretical framework to analyze learning dynamics through the lens of dynamical…

Machine Learning · Computer Science 2025-10-13 Yuchen Lin , Yong Zhang , Sihan Feng , Hong Zhao

Many important phenomena in biochemistry and biology exploit dynamical features such as multi-stability, oscillations, and chaos. Construction of novel chemical systems with such rich dynamics is a challenging problem central to the fields…

Molecular Networks · Quantitative Biology 2026-05-04 Alexander Dack , Benjamin Qureshi , Thomas E. Ouldridge , Tomislav Plesa

Training recurrent neural networks (RNNs) is a high-dimensional process that requires updating numerous parameters. Therefore, it is often difficult to pinpoint the underlying learning mechanisms. To address this challenge, we propose to…

Neurons and Cognition · Quantitative Biology 2025-02-12 Udith Haputhanthri , Liam Storan , Yiqi Jiang , Tarun Raheja , Adam Shai , Orhun Akengin , Nina Miolane , Mark J. Schnitzer , Fatih Dinc , Hidenori Tanaka

Empirical data on real complex systems are becoming increasingly available. Parallel to this is the need for new methods of reconstructing (inferring) the topology of networks from time-resolved observations of their node-dynamics. The…

Dynamical Systems · Mathematics 2019-09-16 Marc G. Leguia , Zoran Levnajic , Ljupco Todorovski , Bernard Zenko

Mean-field analysis is an important tool for understanding dynamics on complex networks. However, surprisingly little attention has been paid to the question of whether mean-field predictions are accurate, and this is particularly true for…

Physics and Society · Physics 2015-03-17 James P. Gleeson , Sergey Melnik , Jonathan A. Ward , Mason A. Porter , Peter J. Mucha