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In this paper we provide an asymptotic expansion for the number of independent sets in a general class of regular, bipartite graphs satisfying some vertex-expansion properties, extending results of Jenssen and Perkins on the hypercube and…

Combinatorics · Mathematics 2025-03-31 Maurício Collares , Joshua Erde , Anna Geisler , Mihyun Kang

The behaviour and functioning of a variety of complex physical and biological systems depend on the spatial organisation of their constituent units, and on the presence and formation of clusters of functionally similar or related…

Physics and Society · Physics 2023-08-16 Silvia Rognone , Vincenzo Nicosia

Graph-based signal processing techniques have become essential for handling data in non-Euclidean spaces. However, there is a growing awareness that these graph models might need to be expanded into `higher-order' domains to effectively…

Machine Learning · Computer Science 2024-04-15 Mustafa Hajij , Ghada Zamzmi , Theodore Papamarkou , Aldo Guzmán-Sáenz , Tolga Birdal , Michael T. Schaub

Although many successful ensemble clustering approaches have been developed in recent years, there are still two limitations to most of the existing approaches. First, they mostly overlook the issue of uncertain links, which may mislead the…

Machine Learning · Statistics 2016-06-06 Dong Huang , Jian-Huang Lai , Chang-Dong Wang

We propose a new clustering algorithm, Extended Affinity Propagation, based on pairwise similarities. Extended Affinity Propagation is developed by modifying Affinity Propagation such that the desirable features of Affinity Propagation,…

Machine Learning · Computer Science 2019-04-17 Rayyan Ahmad Khan , Rana Ali Amjad , Martin Kleinsteuber

For every positive integer $n$, we find a complete classification for planar graphs according to the collection of numbers of common neighbours for every $n$-tuple of distinct vertices. Our results expand the literature on planar graphical…

Combinatorics · Mathematics 2025-11-25 Riccardo W. Maffucci

Modern graph or network datasets often contain rich structure that goes beyond simple pairwise connections between nodes. This calls for complex representations that can capture, for instance, edges of different types as well as so-called…

Social and Information Networks · Computer Science 2020-02-19 Ilya Amburg , Nate Veldt , Austin R. Benson

We derive a series of results on random walks on a d-dimensional hypercubic lattice (lattice paths). We introduce the notions of terse and simple paths corresponding to the path having no backtracking parts (spikes). These paths label…

High Energy Physics - Lattice · Physics 2008-11-26 A. Gonzalez-Arroyo

Correlation clustering is a widely-used approach for clustering large data sets based only on pairwise similarity information. In recent years, there has been a steady stream of better and better classical algorithms for approximating this…

Data Structures and Algorithms · Computer Science 2025-04-08 Sepehr Assadi , Sanjeev Khanna , Aaron Putterman

Compound graphs are networks in which vertices can be grouped into larger subsets, with these subsets capable of further grouping, resulting in a nesting that can be many levels deep. In several applications, including biological workflows,…

Human-Computer Interaction · Computer Science 2024-08-09 Chang Han , Justin Lieffers , Clayton Morrison , Katherine E. Isaacs

We introduce a white graph expansion for the method of perturbative continuous unitary transformations when implemented as a linked cluster expansion. The essential idea behind an expansion in white graphs is to perform an optimized…

Strongly Correlated Electrons · Physics 2015-09-02 K. Coester , K. P. Schmidt

Graph rules for the linked cluster expansion of the Legendre effective action $\Gamma[\phi]$ are derived and proven in $D\geq 2$ Euclidean dimensions. A key aspect is the weight assigned to articulation vertices which is itself shown to be…

Mathematical Physics · Physics 2019-01-30 Rudrajit Banerjee , Max Niedermaier

The latent space approach to complex networks has revealed fundamental principles and symmetries, enabling geometric methods. However, the conditions under which network topology implies geometricity remain unclear. We provide a…

Physics and Society · Physics 2025-04-03 Roya Aliakbarisani , Marián Boguñá , M. Ángeles Serrano

Motivated by applications in social and biological network analysis, we introduce a new form of agnostic clustering termed~\emph{motif correlation clustering}, which aims to minimize the cost of clustering errors associated with both edges…

Data Structures and Algorithms · Computer Science 2018-11-07 Pan Li , Gregory J. Puleo , Olgica Milenkovic

We develop a numerical linked cluster expansion (NLCE) method that can be applied directly to inhomogeneous systems, for example Hamiltonians with disorder and dynamics initiated from inhomogeneous initial states. We demonstrate the method…

Strongly Correlated Electrons · Physics 2020-07-22 Johann Gan , Kaden R. A. Hazzard

A widely-used operation on graphs is local clustering, i.e., extracting a well-characterized community around a seed node without the need to process the whole graph. Recently local motif clustering has been proposed: it looks for a local…

Social and Information Networks · Computer Science 2022-05-13 Adil Chhabra , Marcelo Fonseca Faraj , Christian Schulz

Here we introduce simple structures for the analysis of complex hypergraphs, hypergraph animals. These structures are designed to describe the local node neighbourhoods of nodes in hypergraphs. We establish their relationships to lattice…

Molecular Networks · Quantitative Biology 2024-07-08 Michael P. H. Stumpf

We have proposed a model based upon flocking on a complex network, and then developed two clustering algorithms on the basis of it. In the algorithms, firstly a \textit{k}-nearest neighbor (knn) graph as a weighted and directed graph is…

Machine Learning · Computer Science 2008-12-31 Qiang Li , Yan He , Jing-ping Jiang

We propose a novel graph clustering method guided by additional information on the underlying structure of the clusters (or communities). The problem is formulated as the matching of a graph to a template with smaller dimension, hence…

Machine Learning · Statistics 2021-07-06 Mateus Riva , Florian Yger , Pietro Gori , Roberto M. Cesar , Isabelle Bloch

Graph clustering is a longstanding research topic, and has achieved remarkable success with the deep learning methods in recent years. Nevertheless, we observe that several important issues largely remain open. On the one hand, graph…

Machine Learning · Computer Science 2023-05-08 Li Sun , Feiyang Wang , Junda Ye , Hao Peng , Philip S. Yu