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I report the status of the dynamical overlap fermion project by the JLQCD and TWQCD collaborations. So far, the simulations have been completed with two flavors of overlap sea quarks in a wide range of sea quark mass corresponding the…

High Energy Physics - Lattice · Physics 2019-08-14 Hideo Matsufuru

A number of stochastic methods developed for the calculation of fermion loops are investigated and compared, in particular with respect to their efficiency when implemented on Graphics Processing Units (GPUs). We assess the performance of…

High Energy Physics - Lattice · Physics 2015-06-17 C. Alexandrou , M. Constantinou , V. Drach , K. Hadjiyiannakou , K. Jansen , G. Koutsou , A. Strelchenko , A. Vaquero

We develop a Hamiltonian formalism for simulating interacting chiral fermions on the lattice while preserving unitarity and locality and without breaking the chiral symmetry. The fermion doubling problem is circumvented by constructing a…

High Energy Physics - Lattice · Physics 2024-06-05 Jutho Haegeman , Laurens Lootens , Quinten Mortier , Alexander Stottmeister , Atsushi Ueda , Frank Verstraete

In this paper we introduce a new sampling algorithm which has the potential to be adopted as a universal replacement to the Metropolis--Hastings algorithm. It is related to the slice sampler, and motivated by an algorithm which is…

Computation · Statistics 2020-10-19 Yanxin Li , Stephen G. Walker

Simulations for the thermodynamics of the 2+1 flavor QCD are performed employing chiral fermions. The use of M\"obius domain-wall fermions with stout-link smearing is more effective on the finer lattices where all the relevant chiral…

High Energy Physics - Lattice · Physics 2021-12-23 Sinya Aoki , Yasumichi Aoki , Hidenori Fukaya , Shoji Hashimoto , Issaku Kanamori , Takashi Kaneko , Yoshifumi Nakamura

Deterministic compartmental models are predominantly used in the modeling of infectious diseases, though stochastic models are considered more realistic, yet are complicated to estimate due to missing data. In this paper we present a novel…

Computation · Statistics 2022-06-22 Shuying Wang , Stephen G. Walker

Stochastic models of chemical systems are often analysed by solving the corresponding Fokker-Planck equation which is a drift-diffusion partial differential equation for the probability distribution function. Efficient numerical solution of…

Numerical Analysis · Mathematics 2011-11-10 Simon L. Cotter , Tomas Vejchodsky , Radek Erban

Markov Chain Monte Carlo (MCMC) methods have a drawback when working with a target distribution or likelihood function that is computationally expensive to evaluate, specially when working with big data. This paper focuses on…

Machine Learning · Computer Science 2019-10-22 Asif J. Chowdhury , Gabriel Terejanu

Identifying the start time of a sequence of symbols received at the receiver, commonly referred to as \emph{frame synchronization}, is a critical task for achieving good performance in digital communications systems employing…

Signal Processing · Electrical Eng. & Systems 2020-07-14 Oren Kolaman , Ron Dabora

Graphical model estimation from multi-omics data requires a balance between statistical estimation performance and computational scalability. We introduce a novel pseudolikelihood-based graphical model framework that reparameterizes the…

Machine Learning · Statistics 2025-09-23 Sungdong Lee , Joshua Bang , Youngrae Kim , Hyungwon Choi , Sang-Yun Oh , Joong-Ho Won

We introduce a new method for online parameter estimation in stochastic interacting particle systems, based on continuous observation of a small number of particles from the system. Our method recursively updates the model parameters using…

Statistics Theory · Mathematics 2026-02-25 Louis Sharrock , Nikolas Kantas , Grigorios A. Pavliotis

Nowadays, algorithms with fast convergence, small memory footprints, and low per-iteration complexity are particularly favorable for artificial intelligence applications. In this paper, we propose a doubly stochastic algorithm with a novel…

Machine Learning · Computer Science 2023-04-25 Zebang Shen , Hui Qian , Tongzhou Mu , Chao Zhang

Various kinetic Monte Carlo algorithms become inefficient when some of the population sizes in a system are large, which gives rise to a large number of reaction events per unit time. Here, we present a new acceleration algorithm based on…

Quantitative Methods · Quantitative Biology 2019-07-24 Yen Ting Lin , Song Feng , William S. Hlavacek

We study the performance of QCD simulations with dynamical Wilson fermions by combining the Hybrid Monte Carlo algorithm with parallel tempering on $10^4$ and $12^4$ lattices. In order to compare tempered with standard simulations,…

High Energy Physics - Lattice · Physics 2009-11-07 E. -M. Ilgenfritz , W. Kerler , M. Muller-Preussker , H. Stuben

We present an exact dynamical QCD simulation algorithm for the $O(a)$-improved Wilson fermion with odd number of flavors. Our algorithm is an extension of the non-Hermitian polynomials HMC algorithm proposed by Takaishi and de Forcrand…

Motivated by applications to multi-antenna wireless networks, we propose a distributed and asynchronous algorithm for stochastic semidefinite programming. This algorithm is a stochastic approximation of a continous- time matrix exponential…

Optimization and Control · Mathematics 2016-06-15 Bruno Gaujal , Panayotis Mertikopoulos

Recently we developed a local and constructive algorithm based on Lie algebraic methods for compressing Trotterized evolution under Hamiltonians that can be mapped to free fermions. The compression algorithm yields a circuit which scales…

We apply a recent proposal to speed up the Hybrid-Monte-Carlo simulation of systems with dynamical fermions to two flavor QCD with clover-improvement. For our smallest quark masses we see a speed-up of more than a factor of two compared…

High Energy Physics - Lattice · Physics 2009-11-07 M. Hasenbusch , K. Jansen

The recently developed stochastic gradient method combined with Monte Carlo sampling techniques [PRB {\bf 95}, 195154 (2017)] offers a low scaling and accurate method to optimize the projected entangled pair states (PEPS). We extended this…

Strongly Correlated Electrons · Physics 2019-06-05 Shao-Jun Dong , Chao Wang , Yongjian Han , Guang-can Guo , Lixin He

We study the pion spectrum (and in particular taste-symmetry breaking within it) using HYP-smeared valence staggered fermions on the coarse and fine MILC lattices (which have asqtad staggered sea quarks). We focus on the dependence on…

High Energy Physics - Lattice · Physics 2010-01-21 David Adams , Taegil Bae , Hyung-Jin Kim , Jongjeong Kim , Kwangwoo Kim , Boram Yoon , Weonjong Lee , Chulwoo Jung , Stephen R. Sharpe