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The gene set analysis (GSA) is a foundational approach for uncovering the molecular functions associated with a group of genes. Recently, LLM-powered methods have emerged to annotate gene sets with biological functions together with…

Genomics · Quantitative Biology 2025-09-16 Zhizheng Wang , Yifan Yang , Qiao Jin , Zhiyong Lu

In this study, we analyze various Iterative Stockholder Analysis (ISA) methods for molecular density partitioning, focusing on the numerical performance of the recently proposed Linear approximation of Iterative Stockholder Analysis model…

Chemical Physics · Physics 2025-02-13 YingXing Cheng , Eric Cancès , Virginie Ehrlacher , Alston J. Misquitta , Benjamin Stamm

The last 30 years have seen the creation of a variety of electronic collaboration tools for science and business. Some of the best-known collaboration tools support text editing (e.g., wikis). Wikipedia's success shows that large-scale…

Databases · Computer Science 2009-06-05 Sylvie Noel , Daniel Lemire

The last few years have seen the emergence of a wide array of novel techniques for analyzing high-precision data from upcoming galaxy surveys, which aim to extend the statistical analysis of galaxy clustering data beyond the linear regime…

Academic challenges comprise effective means for (i) advancing the state of the art, (ii) putting in the spotlight of a scientific community specific topics and problems, as well as (iii) closing the gap for under represented communities in…

Machine Learning · Computer Science 2023-12-04 Hugo Jair Escalante , Aleksandra Kruchinina

The space mission LISA (Laser Interferometer Space Antenna), scheduled for launch in 2035, aims to detect gravitational wave (GW) signals in the milli-Hz band. In the context of ESA Voyage 2050 Call for new mission concepts, other frequency…

High Energy Astrophysical Phenomena · Physics 2025-10-22 Alice Perego , Matteo Bonetti , Alberto Sesana , Silvia Toonen , Valeriya Korol

We introduce Loki, an open-source tool designed to address the growing problem of misinformation. Loki adopts a human-centered approach, striking a balance between the quality of fact-checking and the cost of human involvement. It…

Computation and Language · Computer Science 2024-10-03 Haonan Li , Xudong Han , Hao Wang , Yuxia Wang , Minghan Wang , Rui Xing , Yilin Geng , Zenan Zhai , Preslav Nakov , Timothy Baldwin

Over the past 15 years, hundreds of bias mitigation methods have been proposed in the pursuit of fairness in machine learning (ML). However, algorithmic biases are domain-, task-, and model-specific, leading to a `portability trap': bias…

Machine Learning · Computer Science 2025-05-29 MaryBeth Defrance , Guillaume Bied , Maarten Buyl , Jefrey Lijffijt , Tijl De Bie

In the last few years there has been an enormous effort in parameter estimation studies for different sources with the space based gravitational wave detector, LISA. While these studies have investigated sources of differing complexity, the…

General Relativity and Quantum Cosmology · Physics 2010-10-11 Jérôme Carré , Edward K. Porter

Over the last twenty years, significant progress has been made in designing and implementing Question Answering (QA) systems. However, addressing complex questions, the answers to which are spread across multiple documents, remains a…

Computation and Language · Computer Science 2026-02-26 Sourav Saha , Dwaipayan Roy , Mandar Mitra

I review the expected Galactic sources of gravitational waves, concentrating on the low-frequency domain and summarise the current observational and theoretical knowledge we have. A model for the Galactic population of close binaries, which…

Astrophysics · Physics 2009-11-10 G. Nelemans

We forecast the prospective of detection for a stochastic gravitational wave background sourced by cosmological first-order phase transitions. We focus on first-order phase transitions with negligible plasma effects, and consider the…

Cosmology and Nongalactic Astrophysics · Physics 2018-10-30 Daniel G. Figueroa , Eugenio Megias , Germano Nardini , Mauro Pieroni , Mariano Quiros , Angelo Ricciardone , Gianmassimo Tasinato

While Large Language Models (LLMs) excel in general domains, their reliability often falls short in scientific problem-solving. The advancement of scientific AI depends on large-scale, high-quality corpora. However, existing scientific…

Computation and Language · Computer Science 2025-10-03 You-Le Fang , Dong-Shan Jian , Xiang Li , Ce Meng , Ling-Shi Meng , Chen-Xu Yan , Zhi-Zhang Bian , Yan-Qing Ma

The F-statistic is an optimal detection statistic for continuous gravitational waves, i.e., long-duration (quasi-)monochromatic signals with slowly-varying intrinsic frequency. This method was originally developed in the context of…

General Relativity and Quantum Cosmology · Physics 2008-11-26 Reinhard Prix , John T. Whelan

To ensure the fairness and trustworthiness of machine learning (ML) systems, recent legislative initiatives and relevant research in the ML community have pointed out the need to document the data used to train ML models. Besides,…

Machine Learning · Computer Science 2024-12-18 Joan Giner-Miguelez , Abel Gómez , Jordi Cabot

We study the problem of determining what data is required to solve a decision-making task when only partial information about the state of the world is available. Focusing on linear programs, we introduce a decision-focused notion of data…

Optimization and Control · Mathematics 2026-02-18 Omar Bennouna , Amine Bennouna , Saurabh Amin , Asuman Ozdaglar

Large Language Models (LLMs) excel at various tasks, including solving math word problems (MWPs), but struggle with real-world problems containing irrelevant information. To address this, we propose a prompting framework that generates…

Computation and Language · Computer Science 2025-09-17 Ujjwala Anantheswaran , Himanshu Gupta , Kevin Scaria , Shreyas Verma , Chitta Baral , Swaroop Mishra

Tabular data is difficult to analyze and to search through, yielding for new tools and interfaces that would allow even non tech-savvy users to gain insights from open datasets without resorting to specialized data analysis tools or even…

Information Retrieval · Computer Science 2017-08-31 Svitlana Vakulenko , Vadim Savenkov

We provide the syntax and semantics of the LISA (for "Litmus Instruction Set Architecture") language. The parallel assembly language LISA is implemented in the herd7 tool (http://virginia.cs.ucl.ac.uk/herd/) for simulating weak consistency…

Programming Languages · Computer Science 2016-08-24 Jade ALglave , Patrick Cousot