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In this paper, we present an assortment of both standard and advanced Fourier techniques that are useful in the analysis of astrophysical time series of very long duration -- where the observation time is much greater than the time…

Astrophysics · Physics 2009-11-07 Scott M. Ransom , Stephen S. Eikenberry , John Middleditch

This paper describes a method to efficiently retrieve protein database sequences similar to a query sequence, while allowing for significant numbers of mutations. We call this method SEQR for SEQuence Retrieval. This approach increases the…

Genomics · Quantitative Biology 2018-11-05 David I. Hurwitz , Lianyi Han , Lewis Y. Geer

Given a time series vector, how can we efficiently compute a specified part of Fourier coefficients? Fast Fourier transform (FFT) is a widely used algorithm that computes the discrete Fourier transform in many machine learning applications.…

Machine Learning · Computer Science 2020-08-31 Yong-chan Park , Jun-Gi Jang , U Kang

Discrete Fourier Transform (DFT) is widely used in signal processing to analyze the frequencies in a discrete signal. However, DFT fails to recover the exact Fourier spectrum, when the signal contains frequencies that do not correspond to…

Data Analysis, Statistics and Probability · Physics 2015-06-15 M. Andrecut

The $N$-point discrete Fourier transform (DFT) is a cornerstone for several signal processing applications. Many of these applications operate in real-time, making the computational complexity of the DFT a critical performance indicator to…

Data Structures and Algorithms · Computer Science 2024-12-18 Saulo Queiroz , João P. Vilela , Edmundo Monteiro

This paper proposes a general framework for matching similar subsequences in both time series and string databases. The matching results are pairs of query subsequences and database subsequences. The framework finds all possible pairs of…

Databases · Computer Science 2012-08-02 Haohan Zhu , George Kollios , Vassilis Athitsos

We present a novel method for efficiently searching top-k neighbors for documents represented in high dimensional space of terms based on the cosine similarity. Mostly, documents are stored as bag-of-words tf-idf representation. One of the…

Information Retrieval · Computer Science 2016-05-24 Gaurav Singh , Benjamin Piwowarski

We study a set of linear transformations on the Fourier series representation of a sequence that can be used as the basis for similarity queries on time-series data. We show that our set of transformations is rich enough to formulate…

Databases · Computer Science 2007-05-23 Davood Rafiei , Alberto Mendelzon

Discrete cosine transform (DCT) and other Fourier-related transforms have broad applications in scientific computing. However, off-the-shelf high-performance multi-dimensional DCT (MD DCT) libraries are not readily available in parallel…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-05 Zixuan Jiang , Jiaqi Gu , David Z. Pan

In this paper we consider Sparse Fourier Transform (SFT) algorithms for approximately computing the best $s$-term approximation of the Discrete Fourier Transform (DFT) $\mathbf{\hat{f}} \in \mathbb{C}^N$ of any given input vector…

Numerical Analysis · Mathematics 2017-06-12 Sami Merhi , Ruochuan Zhang , Mark A. Iwen , Andrew Christlieb

We revisit the classical problem of Fourier-sparse signal reconstruction -- a variant of the \emph{Set Query} problem -- which asks to efficiently reconstruct (a subset of) a $d$-dimensional Fourier-sparse signal ($\|\hat{x}(t)\|_0 \leq…

Data Structures and Algorithms · Computer Science 2023-11-21 Yeqi Gao , Zhao Song , Baocheng Sun , Omri Weinstein , Ruizhe Zhang

We develop the uniform sparse Fast Fourier Transform (usFFT), an efficient, non-intrusive, adaptive algorithm for the solution of elliptic partial differential equations with random coefficients. The algorithm is an adaption of the sparse…

Numerical Analysis · Mathematics 2022-09-05 Lutz Kämmerer , Daniel Potts , Fabian Taubert

We propose an approximation algorithm for efficient correlation search in time series data. In our method, we use Fourier transform and neural network to embed time series into a low-dimensional Euclidean space. The given space is learned…

Machine Learning · Computer Science 2018-05-16 Han Qiu , Hoang Thanh Lam , Francesco Fusco , Mathieu Sinn

Similarity search is a fundamental operation for analyzing data series (DS), which are ordered sequences of real values. To enhance efficiency, summarization techniques are employed that reduce the dimensionality of DS. SAX-based approaches…

Databases · Computer Science 2024-12-04 Patrick Schäfer , Jakob Brand , Ulf Leser , Botao Peng , Themis Palpanas

We consider finite approximations of a fractal generated by an iterated function system of affine transformations on $\mathbb{R}^d$ as a discrete set of data points. Considering a signal supported on this finite approximation, we propose a…

Functional Analysis · Mathematics 2016-07-14 Calvin Hotchkiss , Eric S. Weber

This paper presents a novel boundary-optimized fast Fourier extension algorithm for efficient approximation of non-periodic functions. The proposed methodology constructs periodic extensions through strategic utilization of boundary…

Numerical Analysis · Mathematics 2025-08-27 Z. Y. Zhao , Y. F Wang , A. G. Yagola

A search query consists of several words. In a proximity full-text search, we want to find documents that contain these words near each other. This task requires much time when the query consists of high-frequently occurring words. If we…

Information Retrieval · Computer Science 2020-09-08 Alexander B. Veretennikov

Fast Fourier Transform (FFT) is an efficient algorithm to compute the Discrete Fourier Transform (DFT) and its inverse. In this paper, we pay special attention to the description of complex-data FFT. We analyze two common descriptions of…

Numerical Analysis · Computer Science 2011-10-28 Zhengjun Cao , Xiao Fan

The paper is concerned with the time efficient processing of spatiotemporal predicates, i.e. spatial predicates associated with an exact temporal constraint. A set of such predicates forms a buffer query or a Spatio-temporal Pattern (STP)…

Databases · Computer Science 2008-12-18 Lagogiannis George , Lorentzos Nikos , Sioutas Spyros , Theodoridis Evaggelos

Discrete transforms such as the discrete Fourier transform (DFT) and the discrete Hartley transform (DHT) are important tools in numerical analysis. The successful application of transform techniques relies on the existence of efficient…

Numerical Analysis · Computer Science 2015-02-06 H. M. de Oliveira , R. J. Cintra , R. M. Campello de Souza
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