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Background: Computational analysis of next-generation sequencing data is outpaced by data generation in many cases. In one such case, paired-end reads can be produced from the Illumina sequencing method faster than they can be overlapped by…

Genomics · Quantitative Biology 2013-04-18 Russell J. Dickson , Gregory B. Gloor

In this paper, we provide a deterministic polynomial time algorithm that determines satisfiability of 3-SAT. The complexity analysis for the algorithm takes into account no efficiency and yet provides a low enough bound, that efficient…

Data Structures and Algorithms · Computer Science 2020-07-02 Ortho Flint , Asanka Wickramasinghe , Jason Brasse , Christopher Fowler

The question of whether the complexity class P is equal to the complexity class NP has been a seemingly intractable problem for over 4 decades. It has been clear that if an algorithm existed that would solve the problems in the NP class in…

Computational Complexity · Computer Science 2015-06-04 Jason W. Steinmetz

The problem 2-quantum-satisfiability (2-QSAT) is the generalisation of the 2-CNF-SAT problem to quantum bits, and is equivalent to determining whether or not a spin-1/2 Hamiltonian with two-body terms is frustration-free. Similarly to the…

Quantum Physics · Physics 2014-07-02 Niel de Beaudrap

This work introduces StageSAT, a new approach to solving floating-point satisfiability that bridges SMT solving with numerical optimization. StageSAT reframes a floating-point formula as a series of optimization problems in three stages of…

Programming Languages · Computer Science 2026-01-09 Yuanzhuo Zhang , Zhoulai Fu , Binoy Ravindran

A new quantum algorithm is proposed to solve Satisfiability(SAT) problems by taking advantage of non-unitary transformation in ground state quantum computer. The energy gap scale of the ground state quantum computer is analyzed for 3-bit…

Quantum Physics · Physics 2015-06-26 Wenjin Mao

PolySAT is a word-level decision procedure supporting bit-precise SMT reasoning over polynomial arithmetic with large bit-vector operations. The PolySAT calculus extends conflict-driven clause learning modulo theories with two key…

Logic in Computer Science · Computer Science 2024-06-10 Jakob Rath , Clemens Eisenhofer , Daniela Kaufmann , Nikolaj Bjørner , Laura Kovács

A recent paper by Jordan et al. introduced Decoded Quantum Interferometry (DQI), a novel quantum algorithm that uses the quantum Fourier transform to reduce linear optimization problems -- max-XORSAT and max-LINSAT -- to decoding problems.…

Quantum Physics · Physics 2026-03-11 Daniel Cohen Hillel

Optimization problems such as the NP-complete 3-SAT provide an important benchmark for the difficult task of finding ground-states in strongly correlated many-body systems with rugged energy landscapes. The study of random 3-SAT problems as…

Statistical Mechanics · Physics 2026-05-21 J. Schwardt , J. C. Budich

High-dimensional numerical optimization presents a persistent challenge in computational science. This paper introduces Quasi-Adaptive Search with Asymptotic Reinitialization (QUASAR), an evolutionary algorithm to accelerate convergence in…

Optimization and Control · Mathematics 2026-02-03 Julian G. Soltes

We present a quantum adiabatic algorithm for a set of quantum 2-satisfiability (Q2SAT) problem, which is a generalization of 2-satisfiability (2SAT) problem. For a Q2SAT problem, we construct the Hamiltonian which is similar to that of a…

Quantum Physics · Physics 2021-02-08 Yanglin Hu , Zhelun Zhang , Biao Wu

Boolean satisfiability [1] (k-SAT) is one of the most studied optimization problems, as an efficient (that is, polynomial-time) solution to k-SAT (for $k\geq 3$) implies efficient solutions to a large number of hard optimization problems…

Computational Complexity · Computer Science 2012-08-03 Maria Ercsey-Ravasz , Zoltan Toroczkai

Satisfiability problem (SAT) is a cornerstone of computational complexity with broad industrial applications, and it remains challenging to optimize modern SAT solvers in real-world settings due to their intricate architectures. While…

Artificial Intelligence · Computer Science 2025-07-31 Yiwen Sun , Furong Ye , Zhihan Chen , Ke Wei , Shaowei Cai

The search of hardware-compatible strategies for solving NP-hard combinatorial optimization problems (COPs) is an important challenge of today s computing research because of their wide range of applications in real world optimization…

Here we study the NP-complete $K$-SAT problem. Although the worst-case complexity of NP-complete problems is conjectured to be exponential, there exist parametrized random ensembles of problems where solutions can typically be found in…

Disordered Systems and Neural Networks · Physics 2019-07-11 Hendrik Schawe , Roman Bleim , Alexander K. Hartmann

With the slowdown of improvement in conventional von Neumann systems, increasing attention is paid to novel paradigms such as Ising machines. They have very different approach to NP-complete optimization problems. Ising machines have shown…

Artificial Intelligence · Computer Science 2023-05-03 Anshujit Sharma , Matthew Burns , Andrew Hahn , Michael Huang

Boolean satisfiability (SAT) is a propositional logic problem of determining whether an assignment of variables satisfies a Boolean formula. Many combinatorial optimization problems can be formulated in Boolean SAT logic -- either as k-SAT…

Optimization and Control · Mathematics 2026-03-12 Robert Simon Fong , Yanming Song , Alexander Yosifov

Let $A$ be a random $m\times n$ matrix over the finite field $F_q$ with precisely $k$ non-zero entries per row and let $y\in F_q^m$ be a random vector chosen independently of $A$. We identify the threshold $m/n$ up to which the linear…

Combinatorics · Mathematics 2022-07-28 Peter Ayre , Amin Coja-Oghlan , Pu Gao , Noëla Müller

Given $k$ collections of 2SAT clauses on the same set of variables $V$, can we find one assignment that satisfies a large fraction of clauses from each collection? We consider such simultaneous constraint satisfaction problems, and design…

Data Structures and Algorithms · Computer Science 2014-07-30 Amey Bhangale , Swastik Kopparty , Sushant Sachdeva

We introduce the problem of finding a satisfying assignment to a CNF formula that must further belong to a prescribed input subspace. Equivalent formulations of the problem include finding a point outside a union of subspaces (the…

Data Structures and Algorithms · Computer Science 2021-08-16 Vikraman Arvind , Venkatesan Guruswami
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