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An evolutionary tree is a rooted tree where each internal vertex has at least two children and where the leaves are labeled with distinct symbols representing species. Evolutionary trees are useful for modeling the evolutionary history of…

Computational Engineering, Finance, and Science · Computer Science 2007-05-23 Ming-Yang Kao

In structural proof theory, designing and working on large calculi make it difficult to get intuitions about each rule individually and as part of a whole system. We introduce two novel tools to help working on calculi using the approach of…

Logic in Computer Science · Computer Science 2022-06-14 Valentin D. Richard

To any tree on $n$ vertices we associate an $n$-dimensional Lotka-Volterra system with $3n-2$ parameters and, for generic values of the parameters, prove it is superintegrable, i.e. it admits $n-1$ functionally independent integrals. We…

Exactly Solvable and Integrable Systems · Physics 2024-10-30 Peter H. van der Kamp , G. R. W. Quispel , D. I. McLaren

Decision trees and their ensembles are very popular models of supervised machine learning. In this paper we merge the ideas underlying decision trees, their ensembles and FCA by proposing a new supervised machine learning model which can be…

Machine Learning · Computer Science 2021-06-02 Egor Dudyrev , Sergei O. Kuznetsov

Hyper-minimization is a state reduction technique that allows a finite change in the semantics. The theory for hyper-minimization of deterministic weighted tree automata is provided. The presence of weights slightly complicates the…

Formal Languages and Automata Theory · Computer Science 2014-05-23 Andreas Maletti , Daniel Quernheim

The main contribution of this paper is the development of a new decision tree algorithm. The proposed approach allows users to guide the algorithm through the data partitioning process. We believe this feature has many applications but in…

Machine Learning · Statistics 2020-10-27 Cédric Beaulac , Jeffrey S. Rosenthal

We explore the tree limits recently defined by Elek and Tardos. In particular, we find tree limits for many classes of random trees. We give general theorems for three classes of conditional Galton-Watson trees and simply generated trees,…

Probability · Mathematics 2021-07-01 Svante Janson

We study languages over infinite alphabets equipped with some structure that can be tested by recognizing automata. We develop a framework for studying such alphabets and the ensuing automata theory, where the key role is played by an…

Logic in Computer Science · Computer Science 2015-07-01 Mikołaj Bojańczyk , Bartek Klin , Sławomir Lasota

We exhibit an identity of abstract simplicial complexes between the well-studied complex of trees and the reduced minimal nested set complex of the partition lattice. We conclude that the order complex of the partition lattice can be…

Combinatorics · Mathematics 2007-05-23 Eva Maria Feichtner

Decision tree optimization is fundamental to interpretable machine learning. The most popular approach is to greedily search for the best feature at every decision point, which is fast but provably suboptimal. Recent approaches find the…

Machine Learning · Computer Science 2025-11-19 Varun Babbar , Hayden McTavish , Cynthia Rudin , Margo Seltzer

We obtain a complete classification of complex-valued sequences which are both multiplicative and automatic.

Number Theory · Mathematics 2021-01-19 Jakub Konieczny , Mariusz Lemańczyk , Clemens Müllner

We present a new definition of non-ambiguous trees (NATs) as labelled binary trees. We thus get a differential equation whose solution can be described combinatorially. This yield a new formula for the number of NATs. We also obtain…

Latent tree learning models represent sentences by composing their words according to an induced parse tree, all based on a downstream task. These models often outperform baselines which use (externally provided) syntax trees to drive the…

Computation and Language · Computer Science 2020-01-16 Jean Maillard , Stephen Clark

Data analysis and machine learning have become an integrative part of the modern scientific methodology, offering automated procedures for the prediction of a phenomenon based on past observations, unraveling underlying patterns in data and…

Machine Learning · Statistics 2015-06-04 Gilles Louppe

Following a remark of Lawvere, we explicitly exhibit a particularly elementary bijection between the set T of finite binary trees and the set T^7 of seven-tuples of such trees. "Particularly elementary" means that the application of the…

Logic · Mathematics 2019-08-27 Andreas Blass

This paper addresses the problem of finding a representation of a subtree distance, which is an extension of the tree metric. We show that a minimal representation is uniquely determined by a given subtree distance, and give a linear time…

Data Structures and Algorithms · Computer Science 2019-02-26 Takanori Maehara , Kazutoshi Ando

We define a new kind of automata recognizing properties of data words or data trees and prove that the automata capture all queries definable in Regular XPath. We show that the automata-theoretic approach may be applied to answer…

Logic in Computer Science · Computer Science 2015-07-01 Mikołaj Bojańczyk , Sławomir Lasota

In this article we define the semigroup associated to a substitution. We use it to construct a minimal automaton which generates a substitution sequence u in reverse reading. We show, in the case where the substitution has a coincidence,…

Dynamical Systems · Mathematics 2023-03-15 Gandhar Joshi , Reem Yassawi

In an asynchronous cooperative editing workflow of a structured document, each of the co-authors receives in the different phases of the editing process, a copy of the document to insert its contribution. For confidentiality reasons, this…

Formal Languages and Automata Theory · Computer Science 2020-09-04 Maurice Tchoupé Tchendji , Milliam Maxime Zekeng Ndadji

The reconstruction of a central tendency `species tree' from a large number of conflicting gene trees is a central problem in systematic biology. Moreover, it becomes particularly problematic when taxon coverage is patchy, so that not all…

Populations and Evolution · Quantitative Biology 2014-05-27 Mike Steel , Joel D. Velasco
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