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Many important problems in Bioinformatics (e.g., assembly or multi-assembly) admit multiple solutions, while the final objective is to report only one. A common approach to deal with this uncertainty is finding safe partial solutions (e.g.,…

Data Structures and Algorithms · Computer Science 2023-02-01 Fernando H. C. Dias , Manuel Caceres , Lucia Williams , Brendan Mumey , Alexandru I. Tomescu

Cat qubits provide appealing building blocks for quantum computing. They exhibit a tunable noise bias yielding an exponential suppression of bit flips with the average photon number and a protection against the remaining phase errors can be…

The remarkable capabilities of Large Language Models (LLMs) are overshadowed by their immense computational cost. While recent work has shown that many LLM layers can be reordered or even removed with minimal impact on accuracy, these…

Machine Learning · Computer Science 2026-01-07 Ramón Calvo González , Daniele Paliotta , Matteo Pagliardini , Martin Jaggi , François Fleuret

We analyze the bit complexity of efficient algorithms for fundamental optimization problems, such as linear regression, $p$-norm regression, and linear programming (LP). State-of-the-art algorithms are iterative, and in terms of the number…

Data Structures and Algorithms · Computer Science 2023-04-06 Mehrdad Ghadiri , Richard Peng , Santosh S. Vempala

Compressive Macroscopic Fluorescence Lifetime Imaging (MFLI) is a novel technical implementation that enables monitoring multiple molecular interactions in macroscopic scale. Especially, we reported recently on the development of a…

Medical Physics · Physics 2018-02-23 Ruoyang Yao , Marien Ochoa , Xavier Intes , Pingkun Yan

The main focus of this work is a novel framework for the joint reconstruction and segmentation of parallel MRI (PMRI) brain data. We introduce an image domain deep network for calibrationless recovery of undersampled PMRI data. The proposed…

Image and Video Processing · Electrical Eng. & Systems 2021-02-03 Aniket Pramanik , Mathews Jacob

In this work, we provide energy-efficient architectural support for floating point accuracy. Our goal is to provide accuracy that is far greater than that provided by the processor's hardware floating point unit (FPU). Specifically, for…

Hardware Architecture · Computer Science 2013-09-30 Ralph Nathan , Bryan Anthonio , Shih-Lien Lu , Helia Naeimi , Daniel J. Sorin , Xiaobai Sun

Scan chains provide increased controllability and observability for testing digital circuits. The increased testability, however, can also be a source of information leakage for sensitive designs. The state-of-the-art defenses to secure…

Cryptography and Security · Computer Science 2021-02-01 Dake Chen , Chunxiao Lin , Peter A. Beerel

Phase retrieval, a nonlinear problem prevalent in imaging applications, has been extensively studied using random models, some of which with i.i.d. sensing matrix components. While these models offer robust reconstruction guarantees, they…

Optics · Physics 2024-09-10 Zhiyuan Hu , Julián Tachella , Michael Unser , Jonathan Dong

In this work, we propose Image-to-Image Rectified Flow Reformulation (I2I-RFR), a practical plug-in reformulation that recasts standard I2I regression networks as continuous-time transport models. While pixel-wise I2I regression is simple,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-23 Satoshi Iizuka , Shun Okamoto , Kazuhiro Fukui

Gleeok is a family of low latency keyed pseudorandom functions (PRFs) consisting of three parallel SPN based permutations whose outputs are XORed to form the final value. Both Gleeok-128 and Gleeok-256 use a 256 bit key, with block sizes of…

Cryptography and Security · Computer Science 2025-12-05 Siwei Chen , Peipei Xie , Shengyuan Xu , Xiutao Feng , Zejun Xiang , Xiangyong Zeng

One of the most computationally challenging problems expected for the High-Luminosity Large Hadron Collider (HL-LHC) is determining the trajectory of charged particles during event reconstruction. Algorithms used at the LHC today rely on…

We consider the problem of single link failure in an elastic optical network, (also known as flex-grid WDM network). The task is to reroute optical connections that go through the broken link using free capacity of other links of the…

Networking and Internet Architecture · Computer Science 2024-06-17 Alexander Rubtsov , Bruno Bauwens , Dmitri Shmelkin , Elizaveta Rudenko , Alexey Lavrov

An improved algorithm is proposed for the reconstruction of singular connectivity from the available pairwise connections during preprocessing phase. To evaluate the performance of the algorithm, an in-house computational fluid dynamics…

Computational Engineering, Finance, and Science · Computer Science 2017-11-02 Wang Yong-Xian , Zhang Li-Lun , Che Yong-Gang , Xu Chuan-Fu , Liu Wei , Liu Hua-Yong , Wang Zheng-Hua

Large Language Models (LLMs) are now integral across various domains and have demonstrated impressive performance. Progress, however, rests on the premise that benchmark scores are both accurate and reproducible. We demonstrate that the…

Computation and Language · Computer Science 2025-10-28 Jiayi Yuan , Hao Li , Xinheng Ding , Wenya Xie , Yu-Jhe Li , Wentian Zhao , Kun Wan , Jing Shi , Xia Hu , Zirui Liu

This paper deals with gene networks whose dynamics is assumed to be generated by a continuous-time, linear, time invariant, finite dimensional system (LTI) at steady state. In particular, we deal with the problem of network reconstruction…

Quantitative Methods · Quantitative Biology 2007-05-23 Lorenzo Farina , Ilaria Mogno

Phase retrieval arises in various fields of science and engineering and it is well studied in a finite-dimensional setting. In this paper, we consider an infinite-dimensional phase retrieval problem to reconstruct real-valued signals living…

Information Theory · Computer Science 2016-03-07 Yang Chen , Cheng Cheng , Qiyu Sun , Haichao Wang

Imaging sensors digitize incoming scene light at a dynamic range of 10--12 bits (i.e., 1024--4096 tonal values). The sensor image is then processed onboard the camera and finally quantized to only 8 bits (i.e., 256 tonal values) to conform…

Image and Video Processing · Electrical Eng. & Systems 2021-12-23 Abhijith Punnappurath , Michael S. Brown

A fast Discrete Cosine Transform (DCT) algorithm is introduced that can be of particular interest in image processing. The main features of the algorithm are regularity of the graph and very low arithmetic complexity. The 16-point version…

Information Theory · Computer Science 2022-12-29 Maxim Vashkevich , Alexander Petrovsky

Developers frequently reuse APIs from existing libraries to implement certain functionality. However, learning APIs is difficult due to their large scale and complexity. In this paper, we design an abstract framework NLI2Code to ease the…

Software Engineering · Computer Science 2020-07-08 Qi Shen , Shijun Wu , Yanzhen Zou , Zixiao Zhu , Bing Xie
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