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Massive Multi-Omics Microbiome Database (M3DB) is a data warehousing and analytics solution designed to handle diverse, complex, and unprecedented volumes of sequence and taxonomic classification data obtained in a typical microbiome…

Other Quantitative Biology · Quantitative Biology 2015-12-14 Shaun W. Norris , Steven P. Bradley , Hardik I. Parikh , Nihar U. Sheth

OS-based page sharing is a commonly used optimization in modern systems to reduce memory footprint. Unfortunately, such sharing can cause Flush+Reload cache attacks, whereby a spy periodically flushes a cache line of shared data (using the…

Cryptography and Security · Computer Science 2019-06-07 Gururaj Saileshwar , Moinuddin K. Qureshi

In the current paper, we propose to fuse together stored data (tables) and their functional dependencies (FDs) inside a DBMS. We aim to make FDs first-class citizens: objects which can be queried and used to query data. Our idea is to allow…

Databases · Computer Science 2020-05-19 Nikita Bobrov , Kirill Smirnov , George Chernishev

Storing XML documents in a relational database is a promising solution because relational databases are mature and scale very well and they have the advantages that in a relational database XML data and structured data can coexist making it…

Databases · Computer Science 2012-03-30 Mohammed Adam Ibrahim Fakharaldien , Jasni Mohamed Zain , Norrozila Sulaiman

polyDB is a database for discrete geometric objects. The database is accessible via web and an interface from the software package polymake. It contains various datasets from the area of lattice polytopes, combinatorial polytopes, matroids…

Combinatorics · Mathematics 2017-11-09 Andreas Paffenholz

We propose the client-side AES256 encryption for a cloud SQL DB. A column ciphertext is deterministic or probabilistic. We trust the cloud DBMS for security of its run-time values, e.g., through a moving target defense. The client may send…

Databases · Computer Science 2015-12-22 Sushil Jajodia , Witold Litwin , Thomas Schwarz

Contemporary large language model (LLM) training pipelines require the assembly of internet-scale databases full of text data from a variety of sources (e.g., web, academic, and publishers). Preprocessing these datasets via deduplication --…

Confidential databases (CDBs) are essential for enabling secure queries over sensitive data in untrusted cloud environments using confidential computing hardware. While adoption is growing, widespread deployment is hindered by high…

Cryptography and Security · Computer Science 2026-03-24 Wenxuan Huang , Zhanbo Wang , Mingyu Li

Enabling question answering over tables and databases in natural language has become a key capability in the democratization of insights from tabular data sources. These systems first require retrieval of data that is relevant to a given…

Information Retrieval · Computer Science 2026-03-10 Wojciech Kosiuk , Xingyu Ji , Yeounoh Chung , Fatma Özcan , Madelon Hulsebos

The increasing demand for deep neural inference within database environments has driven the emergence of AI-native DBMSs. However, existing solutions either rely on model-centric designs requiring developers to manually select, configure,…

Traditional database fuzzing techniques primarily focus on syntactic correctness and general SQL structures, leaving critical yet obscure DBMS features, such as system-level modes (e.g., GTID), programmatic constructs (e.g., PROCEDURE),…

Databases · Computer Science 2026-03-24 Yongxin Chen , Zhiyuan Jiang , Chao Zhang , Haoran Xu , Shenglin Xu , Jianping Tang , Zheming Li , Peidai Xie , Yongjun Wang

The abundance of the data in the Internet facilitates the improvement of extraction and processing tools. The trend in the open data publishing encourages the adoption of structured formats like CSV and RDF. However, there is still a…

Information Retrieval · Computer Science 2016-08-08 Mikhail Galkin , Dmitry Mouromtsev , Sören Auer

Using structural informations to summarize graph-structured RDF data is helpful in tackling query performance issues. However, leveraging structural indexes needs to revise or even redesign the internal of RDF systems. Given an RDF dataset…

Databases · Computer Science 2020-01-24 Lei Gai

Data gridding is a common task in astronomy and many other science disciplines. It refers to the resampling of irregularly sampled data to a regular grid. We present cygrid, a library module for the general purpose programming language…

Instrumentation and Methods for Astrophysics · Physics 2016-06-08 B. Winkel , D. Lenz , L. Flöer

We introduce ReservoirComputing.jl, an open source Julia library for reservoir computing models. The software offers a great number of algorithms presented in the literature, and allows to expand on them with both internal and external…

Computational Engineering, Finance, and Science · Computer Science 2023-07-04 Francesco Martinuzzi , Chris Rackauckas , Anas Abdelrehim , Miguel D. Mahecha , Karin Mora

Compression can sometimes improve performance by making more of the data available to the processors faster. We consider the compression of integer keys in a B+-tree index. For this purpose, systems such as IBM DB2 use variable-byte…

Databases · Computer Science 2017-01-18 Daniel Lemire , Christoph Rupp

We discuss long-term preservation of and access to relational databases. The focus is on national archives and science data archives which have to ingest and integrate data from a broad spectrum of vendor-specific relational database…

Digital Libraries · Computer Science 2007-05-23 Stephan Heuscher , Stephan Jaermann , Peter Keller-Marxer , Frank Moehle

When it comes to storing 3D city models in a database, the implementation of the CityGML data model can be quite demanding and often results in complicated schemas. As an example, 3DCityDB, a widely used solution, depends on a schema having…

Encrypted database systems provide a great method for protecting sensitive data in untrusted infrastructures. These systems are built using either special-purpose cryptographic algorithms that support operations over encrypted data, or by…

Cryptography and Security · Computer Science 2019-04-23 Alexey Gribov , Dhinakaran Vinayagamurthy , Sergey Gorbunov

The missing data problem is one of the important issues to address for achieving data quality. While imputation-based methods are designed to achieve data completeness, their efficacy is observed to be diminishing as and when there is…

Multiagent Systems · Computer Science 2026-02-02 Durga Keshav , GVD Praneeth , Chetan Kumar Patruni , Vivek Yelleti , U Sai Ram
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