Related papers: Parameterized Algorithms for Directed Maximum Leaf…
Deciding whether there is a single tree -a supertree- that summarizes the evolutionary information in a collection of unrooted trees is a fundamental problem in phylogenetics. We consider two versions of this question: agreement and…
This paper will show when a rooted path tree of a finite directed rooted graph has only finitely many orbits under the action of its undirected automorphism group (i.e. when it is cocompact). This will allow us to specify which trees are…
We study three problems introduced by Bang-Jensen and Yeo [Theor. Comput. Sci. 2015] and by Bang-Jensen, Havet, and Yeo [Discret. Appl. Math. 2016] about finding disjoint "balanced" spanning rooted substructures in graphs and digraphs,…
In this paper, we introduce two families of planar and self-similar graphs which have small-world properties. The constructed models are based on an iterative process where each step of a certain formulation of modules results in a final…
An oriented graph is a directed graph without directed 2-cycles. Poljak and Turz\'{i}k (1986) proved that every connected oriented graph $G$ on $n$ vertices and $m$ arcs contains an acyclic subgraph with at least $\frac{m}{2}+\frac{n-1}{4}$…
The Directed Rural Postman Problem (DRPP) can be formulated as follows: given a strongly connected directed multigraph $D=(V,A)$ with nonnegative integral weights on the arcs, a subset $R$ of $A$ and a nonnegative integer $\ell$, decide…
Given a connected undirected graph $G$, a spanning tree is a subgraph $T$ of $G$ such that $V(T) = V(G)$ and $T$ is a tree. A collection of $\ell$ spanning trees $T_1,\ldots,T_\ell$ is pairwise $k$-diverse if for every $i \neq j$, $|E(T_i)…
The leafage of a digraph is the minimum number of leaves in a host tree in which it has a subtree intersection representation. We discuss bounds on the leafage in terms of other parameters (including Ferrers dimension), obtaining a string…
A classical result of Koml\'os, S\'ark\"ozy and Szemer\'edi shows that every large $n$-vertex graph with minimum degree at least $(1/2+\gamma)n$ contains all spanning trees of bounded degree. We generalised this result to loose spanning…
In 2009, Kyaw proved that every $n$-vertex connected $K_{1,4}$-free graph $G$ with $\sigma_4(G)\geq n-1$ contains a spanning tree with at most $3$ leaves. In this paper, we prove an analogue of Kyaw's result for connected $K_{1,5}$-free…
A rooted tree $\vec{R}$ is a rooted subtree of a tree $T$ if the tree obtained by replacing the directed edges of $\vec{R}$ by undirected edges is a subtree of $T$. We study the problem of assigning minimum number of colors to a given set…
We show that if $D$ is an $n$-vertex digraph with more than $(k-1)n$ arcs that does not contain any of three forbidden digraphs, then $D$ contains every antidirected tree on $k$ arcs. The forbidden digraphs are those orientations of $K_{2,…
Construction of phylogenetic trees and networks for extant species from their characters represents one of the key problems in phylogenomics. While solution to this problem is not always uniquely defined and there exist multiple methods for…
The Minimum Branch Vertices Spanning Tree problem aims to find a spanning tree $T$ in a given graph $G$ with the fewest branch vertices, defined as vertices with a degree three or more in $T$. This problem, known to be NP-hard, has…
We investigate exact crossing minimization for graphs that differ from trees by a small number of additional edges, for several variants of the crossing minimization problem. In particular, we provide fixed parameter tractable algorithms…
A spanning tree $T$ of a connected graph $G$ is a subgraph of $G$ that is a tree covers all vertices of $G$. The leaf distance of $T$ is defined as the minimum of distances between any two leaves of $T$. A fractional matching of a graph $G$…
Tanglegrams are formed by taking two rooted binary trees $T$ and $S$ with the same number of leaves and uniquely matching each leaf in $T$ with a leaf in $S$. They are usually represented using layouts, which embed the trees and the…
Edmonds' fundamental theorem on arborescences characterizes the existence of $k$ pairwise arc-disjoint spanning arborescences with prescribed root sets in a digraph. In this paper, we study the problem of packing branchings in digraphs…
For all integers $k\geq 3$, we give an $O(n^4)$ time algorithm for the problem whose instance is a graph $G$ of girth at least $k$ together with $k$ vertices and whose question is "Does $G$ contains an induced subgraph containing the $k$…
There has been intensive work on the parameterized complexity of the typically NP-hard task to edit undirected graphs into graphs fulfilling certain given vertex degree constraints. In this work, we lift the investigations to the case of…