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In this paper, we use the cell dynamics method to study the dynamics of phase transformation when three phases exist. The system we study is a two-dimensional system. The system is able to achieve three phases coexistence, which for…

Materials Science · Physics 2009-11-11 M. Iwamatsu

We study the quench dynamics of a topologically trivial one-dimensional gapless wire following its sudden coupling to topological bound states. We find that as the bound states leak into and propagate through the wire, signatures of their…

Mesoscale and Nanoscale Physics · Physics 2020-09-30 Daniel Dahan , Eytan Grosfeld , Babak Seradjeh

Structurally stable (rough) flows on surfaces have only finitely many singularities and finitely many closed orbits, all of which are hyperbolic, and they have no trajectories joining saddle points. The violation of the last property leads…

Dynamical Systems · Mathematics 2017-06-07 Vladislav Kruglov , Dmitry Malyshev , Olga Pochinka

The configuration space network (CSN) of a dynamical system is an effective approach to represent the ensemble of configurations sampled during a simulation and their dynamic connectivity. To elucidate the connection between the CSN…

Statistical Mechanics · Physics 2009-11-13 David Gfeller , Paolo De Los Rios , David Morton de Lachapelle , Guido Caldarelli , Francesco Rao

One of the hallmarks of real networks is their ability to perform increasingly complex tasks as their topology evolves. To explain this, it has been observed that as a network grows certain subsets of the network begin to specialize the…

Adaptation and Self-Organizing Systems · Physics 2020-06-24 Leonid Bunimovich , DJ Passey , Dallas Smith , Benjamin Webb

We use topological data analysis (TDA) to study how data transforms as it passes through successive layers of a deep neural network (DNN). We compute the persistent homology of the activation data for each layer of the network and summarize…

Machine Learning · Computer Science 2022-05-09 Matthew Wheeler , Jose Bouza , Peter Bubenik

In this paper, genus statistics have been applied to an HI column density map of the Small Magellanic Cloud in order to study its topology. To learn how topology changes with the scale of the system, we provide the study of topology for…

Astrophysics · Physics 2009-11-13 A. Chepurnov , A. Lazarian , J. Gordon , S. Stanimirovic

Traditional optimization-based techniques for time-synchronized state estimation (SE) often suffer from high online computational burden, limited phasor measurement unit (PMU) coverage, and presence of non-Gaussian measurement noise.…

Systems and Control · Electrical Eng. & Systems 2025-06-05 Shiva Moshtagh , Behrouz Azimian , Mohammad Golgol , Anamitra Pal

The kinetics of droplet and bridge formation within striped nano-capillaries is studied when the wetting film grows via interface-limited growth. The phenomenological time-dependent Ginzburg-Landau (TDGL)-type model with thermal noise is…

Soft Condensed Matter · Physics 2007-08-14 Masao Iwamatsu

Combinatorial and topological structures, such as graphs, simplicial complexes, and cell complexes, form the foundation of geometric and topological deep learning (GDL and TDL) architectures. These models aggregate signals over such…

Machine Learning · Computer Science 2026-05-28 Chuan-Shen Hu

This paper considers generalised network, intended as networks where (a) the edges connecting the nodes are nonlinear, and (b) stochastic processes are continuously indexed over both vertices and edges. Such topological structures are…

Social and Information Networks · Computer Science 2023-09-29 Tobia Filosi , Claudio Agostinelli , Emilio Porcu

We study the formation of topological defects in nonequilibrium phase transitions of both classical and quantum field theory. We examine three model systems. 1). The phase transition of a quantum scalar field in a FRW universe is analyzed…

High Energy Physics - Phenomenology · Physics 2007-05-23 G. J. Stephens

We study the topological dynamics by iterations of a piecewise continuous, non linear and locally contractive map in a real finite dimensional compact ball. We consider those maps satisfying the "separation property": different continuity…

Dynamical Systems · Mathematics 2011-06-22 Eleonora Catsigeras , Ruben Budelli

The contact process is a simple model for the spread of an infection in a structured population. We investigate the case when the underlying structure evolves dynamically as a degree-dependent dynamical percolation model. Starting with a…

Probability · Mathematics 2026-03-11 Natalia Cardona-Tobón , Marcel Ortgiese , Marco Seiler , Anja Sturm

Networks observed in real world like social networks, collaboration networks etc., exhibit temporal dynamics, i.e. nodes and edges appear and/or disappear over time. In this paper, we propose a generative, latent space based, statistical…

Social and Information Networks · Computer Science 2018-11-08 Shubham Gupta , Gaurav Sharma , Ambedkar Dukkipati

Understanding how deep neural networks learn remains a fundamental challenge in modern machine learning. A growing body of evidence suggests that training dynamics undergo a distinct phase transition, yet our understanding of this…

Machine Learning · Computer Science 2025-05-21 Zhanpeng Zhou , Yongyi Yang , Mahito Sugiyama , Junchi Yan

We study the problem of maintaining robust and sparse overlay networks in fully distributed settings where nodes continuously join and leave the system. This scenario closely models real-world unstructured peer-to-peer networks, where…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-16 Antonio Cruciani

We report a detailed computational study by Brownian Dynamics simulations of the structure and dynamics of a liquid of patchy particles which develops an amorphous tetrahedral network upon decreasing temperature. The highly directional…

Soft Condensed Matter · Physics 2016-12-02 Sandalo Roldan-Vargas , Lorenzo Rovigatti , Francesco Sciortino

Aiming at a better understanding of anomalous and topological effects in gauge theories out-of-equilibrium, we study the real-time dynamics of a prototype model for CP-violation, the massive Schwinger model with a $\theta$-term. We identify…

Quantum Physics · Physics 2019-02-13 T. V. Zache , N. Mueller , J. T. Schneider , F. Jendrzejewski , J. Berges , P. Hauke

Complex gene regulatory networks often display emergent simple behavior. Sometimes this simplicity can be traced to a nearly equivalent energy landscape, but not always. Here, we show how a topological theory for stochastic and biochemical…

Biological Physics · Physics 2025-10-30 Aleksandra Nelson , Peter Wolynes , Evelyn Tang