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Related papers: Event-based Information Extraction for the biomedi…

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Knowledge about entities and their interrelations is a crucial factor of success for tasks like question answering or text summarization. Publicly available knowledge graphs like Wikidata or DBpedia are, however, far from being complete. In…

Information Retrieval · Computer Science 2021-02-16 Nicolas Heist , Heiko Paulheim

Question Answer (QA) systems for biomedical experiments facilitate cross-disciplinary communication, and serve as a foundation for downstream tasks, e.g., laboratory automation. High Information Density (HID) and Multi-Step Reasoning (MSR)…

Artificial Intelligence · Computer Science 2026-01-09 Haofei Hou , Shunyi Zhao , Fanxu Meng , Kairui Yang , Lecheng Ruan , Qining Wang

Temporal information extraction from unstructured text is essential for contextualizing events and deriving actionable insights, particularly in the medical domain. We address the task of extracting clinical events and their temporal…

Computation and Language · Computer Science 2026-01-22 Rochana Chaturvedi , Peyman Baghershahi , Sourav Medya , Barbara Di Eugenio

In this paper we report on the initial activities carried out within a collaboration between Consob and Sapienza University. We focus on Information Extraction from documents describing financial instruments. We discuss how we automate this…

Computation and Language · Computer Science 2022-02-03 Domenico Lembo , Alessandra Limosani , Francesca Medda , Alessandra Monaco , Federico Maria Scafoglieri

The aim of this paper is to report on a novel text reduction technique, called Text Denoising, that highlights information-rich content when processing a large volume of text data, especially from the biomedical domain. The core feature of…

Information Retrieval · Computer Science 2013-08-02 Rushdi Shams

Lifelogging has gained more attention due to its wide applications, such as personalized recommendations or memory assistance. The issues of collecting and extracting personal life events have emerged. People often share their life…

Computation and Language · Computer Science 2023-04-18 Yi-Pei Chen , An-Zi Yen , Hen-Hsen Huang , Hideki Nakayama , Hsin-Hsi Chen

The scientific literature is growing exponentially, and professionals are no more able to cope with the current amount of publications. Text mining provided in the past methods to retrieve and extract information from text; however, most of…

Computation and Language · Computer Science 2019-02-27 Nikola Milosevic , Cassie Gregson , Robert Hernandez , Goran Nenadic

In this paper, an event network is presented for exploring open information, where linguistic units about an event are organized for analysing. The process is divided into three steps: document event detection, event network construction…

Computation and Language · Computer Science 2015-09-01 Yanping Chen

This paper presents a novel approach to epidemic surveillance, leveraging the power of Artificial Intelligence and Large Language Models (LLMs) for effective interpretation of unstructured big data sources, like the popular ProMED and WHO…

Computational Engineering, Finance, and Science · Computer Science 2024-08-27 Sergio Consoli , Peter Markov , Nikolaos I. Stilianakis , Lorenzo Bertolini , Antonio Puertas Gallardo , Mario Ceresa

It is crucial to understand a specific domain by events. Extensive event extraction research has been conducted in many domains such as news, finance, and biology. However, event extraction in scientific domain is still insufficiently…

Computation and Language · Computer Science 2026-04-28 Yi-Fan Lu , Xian-Ling Mao , Bo Wang , Xiao Liu , Heyan Huang

In this paper, we present ISI-Clear, a state-of-the-art, cross-lingual, zero-shot event extraction system and accompanying user interface for event visualization & search. Using only English training data, ISI-Clear makes global events…

Computation and Language · Computer Science 2023-05-19 Chris Jenkins , Shantanu Agarwal , Joel Barry , Steven Fincke , Elizabeth Boschee

Extracting information from documents usually relies on natural language processing methods working on one-dimensional sequences of text. In some cases, for example, for the extraction of key information from semi-structured documents, such…

Computation and Language · Computer Science 2021-06-29 Oliver Bensch , Mirela Popa , Constantin Spille

Consumer Event-Cause Extraction, the task aimed at extracting the potential causes behind certain events in the text, has gained much attention in recent years due to its wide applications. The ICDM 2020 conference sets up an evaluation…

Computation and Language · Computer Science 2024-04-25 Congqing He , Jie Zhang , Xiangyu Zhu , Huan Liu , Yukun Huang

Information extraction systems often produce hundreds to thousands of strings on a specific topic. We present a method that facilitates better consumption of these strings, in an exploratory setting in which a user wants to both get a broad…

Computation and Language · Computer Science 2023-09-20 Itay Yair , Hillel Taub-Tabib , Yoav Goldberg

We present a novel system that automatically extracts and generates informative and descriptive sentences from the biomedical corpus and facilitates the efficient search for relational knowledge. Unlike previous search engines or…

Computation and Language · Computer Science 2023-10-19 Kerui Zhu , Jie Huang , Kevin Chen-Chuan Chang

Biomedical research papers use significantly different language and jargon when compared to typical English text, which reduces the utility of pre-trained NLP models in this domain. Meanwhile Medline, a database of biomedical abstracts,…

Machine Learning · Computer Science 2021-09-15 Justin Sybrandt , Ilya Safro

This paper proposes a new natural language processing (NLP) application for identifying medical jargon terms potentially difficult for patients to comprehend from electronic health record (EHR) notes. We first present a novel and publicly…

Computation and Language · Computer Science 2022-10-13 Sunjae Kwon , Zonghai Yao , Harmon S. Jordan , David A. Levy , Brian Corner , Hong Yu

Relation Extraction is an important task in Information Extraction which deals with identifying semantic relations between entity mentions. Traditionally, relation extraction is carried out after entity extraction in a "pipeline" fashion,…

Computation and Language · Computer Science 2021-03-11 Sachin Pawar , Pushpak Bhattacharyya , Girish K. Palshikar

Relation extraction in the biomedical domain is challenging due to the lack of labeled data and high annotation costs, needing domain experts. Distant supervision is commonly used to tackle the scarcity of annotated data by automatically…

Computation and Language · Computer Science 2022-09-14 Saadullah Amin , Pasquale Minervini , David Chang , Pontus Stenetorp , Günter Neumann

We present an open-source and extensible knowledge extraction toolkit DeepKE, supporting complicated low-resource, document-level and multimodal scenarios in the knowledge base population. DeepKE implements various information extraction…

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