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In research labs, there is often a need to customise software at every step in a given bioinformatics workflow, but traditionally it has been difficult to obtain both a high degree of customisability and good performance.…

Software Engineering · Computer Science 2012-08-23 Gabriel Keeble-Gagnère , Johan Nyström-Persson , Matthew Bellgard , Kenji Mizuguchi

The electroencephalographic (EEG) signals provide highly informative data on brain activities and functions. However, their heterogeneity and high dimensionality may represent an obstacle for their interpretation. The introduction of a…

Neural and Evolutionary Computing · Computer Science 2023-10-26 Aurora Saibene , Francesca Gasparini

This project addresses the need for efficient, real-time analysis of biomedical signals such as electrocardiograms (ECG) and electroencephalograms (EEG) for continuous health monitoring. Traditional methods rely on long-duration data…

Signal Processing · Electrical Eng. & Systems 2025-04-22 Jinhai Hu

The development of a system that would ease the diagnosis of heart diseases would also fasten the work of the cardiologic department in hospitals and facilitate the monitoring of patients with portable devices. This paper presents a tool…

Computational Engineering, Finance, and Science · Computer Science 2017-05-09 Zoja Vulaj , Andjela Draganic , Milos Brajovic , Irena Orovic

In recent years, multiple sensor-based devices and systems have been deployed in smart agriculture, industrial automation, E-Health, etc. The diversity of sensor data types and the amount of data pose critical challenges for data…

Signal Processing · Electrical Eng. & Systems 2024-10-21 Gajraj Kuldeep , Qi Zhang

The AGP format is a tab-separated table format describing how components of a genome assembly fit together. A standard submission format for genome assemblies is a fasta file giving the sequence of contigs along with an AGP file showing how…

Genomics · Quantitative Biology 2025-03-27 Edward S. Ricemeyer , Rachel A. Carroll , Wesley C. Warren

Although electrocardiograms (ECG) play a dominant role in cardiovascular diagnosis and treatment, their intrinsic data forms and representational patterns pose significant challenges for medical multimodal large language models (Med-MLLMs)…

The real time analysis and secure transmission of electrocardiogram (ECG) signals are critical for ensuring both effective medical diagnosis and patient data privacy. In this study, we developed a real time ECG monitoring system that…

Cryptography and Security · Computer Science 2024-11-08 Beyazit Bestami Yuksel , Ayse Yilmazer Metin

General vision encoders like DINOv2 and SAM have recently transformed computer vision. Even though they are trained on natural images, such encoder models have excelled in medical imaging, e.g., in classification, segmentation, and…

Computer Vision and Pattern Recognition · Computer Science 2024-07-19 Fryderyk Kögl , Anna Reithmeir , Vasiliki Sideri-Lampretsa , Ines Machado , Rickmer Braren , Daniel Rückert , Julia A. Schnabel , Veronika A. Zimmer

Data Mining is the process of examining the information from different point of view and compressing it for the relevant data. This data can also be utilized to build the incomes. Data Mining is also known as Data or Knowledge Discovery.…

Databases · Computer Science 2016-10-17 Kratika Tyagi , Prof. Sanjeev Thakur

Genetic Programming (GP) has been primarily used to tackle optimization, classification, and feature selection related tasks. The widespread use of GP is due to its flexible and comprehensible tree-type structure. Similarly, research is…

Computer Vision and Pattern Recognition · Computer Science 2020-06-29 Asifullah Khan , Aqsa Saeed Qureshi , Noorul Wahab , Mutawara Hussain , Muhammad Yousaf Hamza

Electrocardiogram (ECG) is widely used in healthcare applications, such as arrhythmia detection and sleep monitoring, making accurate ECG analysis critically essential. Traditional deep learning models for ECG are task-specific, with…

Signal Processing · Electrical Eng. & Systems 2025-10-14 Yu Han , Vittorio Murino , Xiaofeng Liu , Xiang Zhang , Cheng Ding

Electrocardiograms (ECGs) are among the most widely used diagnostic tools for cardiovascular diseases, and a large amount of ECG data worldwide appears only in image form. However, most existing automated ECG analysis methods rely on access…

Machine Learning · Computer Science 2026-04-03 Hung Manh Pham , Jialu Tang , Aaqib Saeed , Dong Ma , Bin Zhu , Pan Zhou

The growing demand for continuous physiological monitoring and human-machine interaction in real-world settings calls for wearable platforms that are flexible, low-power, and capable of on-device intelligence. This work presents…

Systems and Control · Electrical Eng. & Systems 2025-12-16 Sebastian Frey , Giusy Spacone , Andrea Cossettini , Marco Guermandi , Philipp Schilk , Luca Benini , Victor Kartsch

Federated learning allows distributed medical institutions to collaboratively learn a shared prediction model with privacy protection. While at clinical deployment, the models trained in federated learning can still suffer from performance…

Computer Vision and Pattern Recognition · Computer Science 2021-03-11 Quande Liu , Cheng Chen , Jing Qin , Qi Dou , Pheng-Ann Heng

Generalist foundation models (GFMs) are renowned for their exceptional capability and flexibility in effectively generalizing across diverse tasks and modalities. In the field of medicine, while GFMs exhibit superior generalizability based…

Perhaps surprisingly, the total electron microscopy (EM) data collected to date is less than a cubic millimeter. Consequently, there is an enormous demand in the materials and biological sciences to image at greater speed and lower dosage,…

Computer Vision and Pattern Recognition · Computer Science 2016-12-06 Suhas Sreehari , S. V. Venkatakrishnan , Katherine L. Bouman , Jeffrey P. Simmons , Lawrence F. Drummy , Charles A. Bouman

The increasing number of dispersed EEG dataset publications and the advancement of large-scale Electroencephalogram (EEG) models have increased the demand for practical tools to manage diverse EEG datasets. However, the inherent complexity…

Signal Processing · Electrical Eng. & Systems 2024-10-11 Chengxuan Qin , Rui Yang , Wenlong You , Zhige Chen , Longsheng Zhu , Mengjie Huang , Zidong Wang

The electrocardiogram (ECG) is a cost-effective, highly accessible and widely employed diagnostic tool. With the advent of Foundation Models (FMs), the field of AI-assisted ECG interpretation has begun to evolve, as they enable model reuse…

Artificial Intelligence · Computer Science 2026-01-30 Francesca Filice , Edoardo De Rose , Simone Bartucci , Francesco Calimeri , Simona Perri

Geometric deep learning (GDL) has gained significant attention in scientific fields, for its proficiency in modeling data with intricate geometric structures. However, very few works have delved into its capability of tackling the…

Machine Learning · Computer Science 2024-11-21 Deyu Zou , Shikun Liu , Siqi Miao , Victor Fung , Shiyu Chang , Pan Li