Related papers: An Algebraic View of the Relation between Largest …
Parameterised subgraph counting problems are the most thoroughly studied topic in the theory of parameterised counting, and there has been significant recent progress in this area. Many of the existing tractability results for parameterised…
Pedigree graphs, or family trees, are typically constructed by an expensive process of examining genealogical records to determine which pairs of individuals are parent and child. New methods to automate this process take as input genetic…
In a recent article [5], the authors claim that the distance between the b-chromatic index of a tree and a known upper bound is at most 1. At the same time, in [7] the authors claim to be able to construct a tree where this difference is…
This paper studies the "explanation problem" for tree- and linearly-ordered array data, a problem motivated by database applications and recently solved for the one-dimensional tree-ordered case. In this paper, one is given a matrix A whose…
Recent work has proven the existence of extreme inbreeding in a European ancestry sample taken from the contemporary UK population \cite{nature_01}. This result brings our attention again to a math problem related to inbreeding family trees…
We study the crossing-minimization problem in a layered graph drawing of planar-embedded rooted trees whose leaves have a given total order on the first layer, which adheres to the embedding of each individual tree. The task is then to…
Weak similarities form a special class of mappings between semimetric spaces. Two semimetric spaces $X$ and $Y$ are weakly similar if there exists a weak similarity $\Phi\colon X\to Y$. We find a structural characteristic of finite…
Minimal spanning trees on infinite vertex sets are investigated. A criterion for minimality of a spanning tree having a finite length is obtained, which generalizes the corresponding classical result for finite sets. It is given an analytic…
This paper presents two approaches to quantifying and visualizing variation in datasets of trees. The first approach localizes subtrees in which significant population differences are found through hypothesis testing and sparse classifiers…
A common form of MapReduce application involves discovering relationships between certain pairs of inputs. Similarity joins serve as a good example of this type of problem, which we call a "some-pairs" problem. In the framework of Afrati et…
We first show that increasing trees are in bijection with set compositions, extending simultaneously a recent result on trees due to Tonks and a classical result on increasing binary trees. We then consider algebraic structures on the…
When trained on language data, do transformers learn some arbitrary computation that utilizes the full capacity of the architecture or do they learn a simpler, tree-like computation, hypothesized to underlie compositional meaning systems…
In classification and forecasting with tabular data, one often utilizes tree-based models. Those can be competitive with deep neural networks on tabular data and, under some conditions, explainable. The explainability depends on the depth…
Two graphs are of the same topological type if they can be mutually embedded into each other topologically. We show that there are exactly $\aleph_1$ distinct topological types of countable trees. In general, for any infinite cardinal…
Dual-tree algorithms are a widely used class of branch-and-bound algorithms. Unfortunately, developing dual-tree algorithms for use with different trees and problems is often complex and burdensome. We introduce a four-part logical split:…
Given two phylogenetic trees with the $\{1, \ldots, n\}$ leaf-set the maximum agreement subtree problem asks what is the maximum size of the subset $A \subseteq \{1, \ldots, n\}$ such that the two trees are equivalent when restricted to…
Tree representations of (sets of) symmetric binary relations, or equivalently edge-colored undirected graphs, are of central interest, e.g.\ in phylogenomics. In this context symbolic ultrametrics play a crucial role. Symbolic ultrametrics…
In 1998, B\"{o}cker and Dress gave a 1-to-1 correspondence between symbolically dated rooted trees and symbolic ultrametrics. We consider the corresponding problem for unrooted trees. More precisely, given a tree $T$ with leaf set $X$ and a…
The longest common extension (LCE) of two indices in a string is the length of the longest identical substrings starting at these two indices. The LCE problem asks to preprocess a string into a compact data structure that supports fast LCE…
Following a remark of Lawvere, we explicitly exhibit a particularly elementary bijection between the set T of finite binary trees and the set T^7 of seven-tuples of such trees. "Particularly elementary" means that the application of the…