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The unordered configuration space of $n$ points on a graph $\Gamma,$ denoted here by $UC^n(\Gamma),$ can be viewed as the space of all configurations of $n$ unlabeled robots on a system of one-dimensional tracks, which is interpreted as a…

Algebraic Topology · Mathematics 2020-10-27 Steven Scheirer

We introduce a graph decomposition which exists for all simple, connected graphs $G=(V,E)$. The decomposition $V = A \cup B \cup C$ is such that each vertex in $A$ has more neighbors in $B$ than in $A$ and vice versa. $C$ is `balanced':…

Combinatorics · Mathematics 2021-06-04 Stefan Steinerberger

The complexity class NP of decision problems that can be solved nondeterministically in polynomial time is of great theoretical and practical importance where the notion of polynomial-time reductions between NP-problems is a key concept for…

Computational Complexity · Computer Science 2022-12-23 Hans-Jörg Kreowski , Sabine Kuske , Aaron Lye , Aljoscha Windhorst

This paper proposes a novel representation of decomposable graphs based on semi-latent tree-dependent bipartite graphs. The novel representation has two main benefits. First, it enables a form of sub-clustering within maximal cliques of the…

Methodology · Statistics 2017-12-05 Mohamad Elmasri

Recent investigations in computational biology have focused on a family of 2-colored digraphs, called 2-colored best match graphs, which naturally arise from rooted phylogenetic trees. Actually the defining properties of such graphs are…

Combinatorics · Mathematics 2020-12-01 Annachiara Korchmaros

A useful approach to the mathematical analysis of large-scale biological networks is based upon their decompositions into monotone dynamical systems. This paper deals with two computational problems associated to finding decompositions…

Molecular Networks · Quantitative Biology 2007-05-23 Bhaskar DasGupta , German Andres Enciso , Eduardo Sontag , Yi Zhang

In a sequence of four papers, we prove the following results (via a unified approach) for all sufficiently large $n$: (i) [1-factorization conjecture] Suppose that $n$ is even and $D\geq 2\lceil n/4\rceil -1$. Then every $D$-regular graph…

Combinatorics · Mathematics 2014-10-24 Daniela Kühn , Allan Lo , Deryk Osthus

We propose new algorithms for computing triangular decompositions of polynomial systems incrementally. With respect to previous works, our improvements are based on a {\em weakened} notion of a polynomial GCD modulo a regular chain, which…

Symbolic Computation · Computer Science 2011-04-06 Changbo Chen , Marc Moreno Maza

Graph transformations definable in logic can be described using the notion of transductions. By understanding transductions as a basic embedding mechanism, which captures the possibility of encoding one graph in another graph by means of…

Combinatorics · Mathematics 2025-01-09 Michał Pilipczuk

In recent years, the expander decomposition method was used to develop many graph algorithms, resulting in major improvements to longstanding complexity barriers. This powerful hammer has led the community to (1) believe that most problems…

Data Structures and Algorithms · Computer Science 2022-11-28 Amir Abboud , Nathan Wallheimer

Entanglement is a complexity measure of digraphs that origins in fixed-point logics. Its combinatorial purpose is to measure the nested depth of cycles in digraphs. We address the problem of characterizing the structure of graphs of…

Computer Science and Game Theory · Computer Science 2009-04-13 Walid Belkhir

We introduce graphcodes, a novel multi-scale summary of the topological properties of a dataset that is based on the well-established theory of persistent homology. Graphcodes handle datasets that are filtered along two real-valued scale…

Algebraic Topology · Mathematics 2024-05-24 Michael Kerber , Florian Russold

We consider monotonicity problems for graph searching games. Variants of these games - defined by the type of moves allowed for the players - have been found to be closely connected to graph decompositions and associated width measures such…

Discrete Mathematics · Computer Science 2008-02-18 Stephan Kreutzer , Sebastian Ordyniak

In this paper, we prove that the self-dual morphological hierarchical structure computed on a n-D gray-level wellcomposed image u by the algorithm of G{\'e}raud et al. [1] is exactly the mathematical structure defined to be the tree of…

Discrete Mathematics · Computer Science 2022-06-13 Thierry GÉraud , Nicolas Boutry , Sébastien Crozet , Edwin Carlinet , Laurent Najman

Deciding whether a graph can be embedded in a grid using only unit-length edges is NP-complete, even when restricted to binary trees. However, it is not difficult to devise a number of graph classes for which the problem is polynomial, even…

Data Structures and Algorithms · Computer Science 2012-04-13 Vinícius G. P. de Sá , Guilherme D. da Fonseca , Raphael Machado , Celina M. H. de Figueiredo

Partition of unity methods (PUMs) on graphs represent straightforward and remarkably adaptable auxiliary techniques for graph signal processing. By relying solely on the intrinsic graph structure, we propose the generation of a partition of…

Numerical Analysis · Mathematics 2023-11-09 Roberto Cavoretto , Alessandra De Rossi , Sandro Lancellotti , Federico Romaniello

We are developing an interactive graph exploration system called Graph Playground for making sense of large graphs. Graph Playground offers a fast and scalable edge decomposition algorithm, based on iterative vertex-edge peeling, to…

Human-Computer Interaction · Computer Science 2018-08-15 James Abello , Fred Hohman , Varun Bezzam , Duen Horng Chau

Graph transformation is the rule-based modification of graphs, and is a discipline dating back to the 1970s. The declarative nature of graph rewriting rules comes at a cost. In general, to match the left-hand graph of a fixed rule within a…

Logic in Computer Science · Computer Science 2021-01-05 Graham Campbell

Let H be a graph, and let C_H(G) be the number of (subgraph isomorphic) copies of H contained in a graph G. We investigate the fundamental problem of estimating C_H(G). Previous results cover only a few specific instances of this general…

Data Structures and Algorithms · Computer Science 2019-02-20 Martin Furer , Shiva Prasad Kasiviswanathan

We study an extension of the classical graph cut problem, wherein we replace the modular (sum of edge weights) cost function by a submodular set function defined over graph edges. Special cases of this problem have appeared in different…

Data Structures and Algorithms · Computer Science 2016-03-29 Stefanie Jegelka , Jeff Bilmes
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