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We develop a purely set-theoretic formalism for binary trees and binary graphs. We define a category of binary automata, and display it as a fibred category over the category of binary graphs. We also relate the notion of binary graphs to…

Combinatorics · Mathematics 2007-05-23 N. Raghavendra

Foundation models have emerged as critical components in a variety of artificial intelligence applications, and showcase significant success in natural language processing and several other domains. Meanwhile, the field of graph machine…

Machine Learning · Computer Science 2025-03-11 Jiawei Liu , Cheng Yang , Zhiyuan Lu , Junze Chen , Yibo Li , Mengmei Zhang , Ting Bai , Yuan Fang , Lichao Sun , Philip S. Yu , Chuan Shi

Schematic maps are in daily use to show the connectivity of subway systems and to facilitate travellers to plan their journeys effectively. This study surveys up-to-date algorithmic approaches in order to give an overview of the state of…

Physics and Society · Physics 2022-08-16 Hsiang-Yun Wu , Benjamin Niedermann , Shigeo Takahashi , Martin Nöllenburg

Geospatial sciences include a wide range of applications, from environmental monitoring transportation to infrastructure planning, as well as location-based analysis and services. Graph theory algorithms in mathematics have emerged as…

Machine Learning · Computer Science 2023-10-10 Surajit Ghosh , Archita Mallick , Anuva Chowdhury , Kounik De Sarkar

Complex networks or graphs are ubiquitous in sciences and engineering: biological networks, brain networks, transportation networks, social networks, and the World Wide Web, to name a few. Spectral graph theory provides a set of useful…

Statistics Theory · Mathematics 2019-01-23 Subhadeep Mukhopadhyay , Kaijun Wang

With traditional computing technologies reaching their limit, a new field has emerged seeking to follow the example of the human brain into a new era: neuromorphic computing. This paper provides an introduction to neuromorphic computing,…

Neural and Evolutionary Computing · Computer Science 2025-10-20 Benedikt Jung , Maximilian Kalcher , Merlin Marinova , Piper Powell , Esma Sakalli

In this paper we will present the two basic operations for database schemas used in database mapping systems (separation and Data Federation), and we will explain why the functorial semantics for database mappings needed a new base category…

Databases · Computer Science 2011-04-27 Zoran Majkic

Artificial intelligence has made great strides in the last decade but still falls short of the human brain, the best-known example of intelligence. Not much is known of the neural processes that allow the brain to make the leap to achieve…

Artificial Intelligence · Computer Science 2021-08-13 Ananta Nair

Graphs, and sequences of growing graphs, can be used to specify the architecture of mathematical models in many fields including machine learning and computational science. Here we define structured graph "lineages" (ordered by level…

Computer Vision and Pattern Recognition · Computer Science 2025-08-04 Eric Mjolsness , Cory B. Scott

Presenting systems of differential equations in the form of diagrams has become common in certain parts of physics, especially electromagnetism and computational physics. In this work, we aim to put such use of diagrams on a firm…

Mathematical Physics · Physics 2022-06-20 Evan Patterson , Andrew Baas , Timothy Hosgood , James Fairbanks

In this paper we develop a structure called Link Algebra, in which we present a Set with two binary operations and an axiom system developed from the study of graph theory and set/antiset theory, sowing main theorems and definitions. Once…

Rings and Algebras · Mathematics 2011-03-22 Alfonso Bustamante

This paper introduces a biomathematical model designed to describe the internal dynamics of dream formation and spontaneous cognitive processes. The model incorporates neurocognitive factors such as dissatisfaction, acceptance, forgetting,…

Neurons and Cognition · Quantitative Biology 2025-05-12 Shirmohammad Tavangari , Sajjad Janfaza , Zahra Shakarami , Aref Yelghi

In psychiatry, we often speak of constructing "models." Here we try to make sense of what such a claim might mean, starting with the most fundamental question: "What is (and isn't) a model?". We then discuss, in a concrete measurable sense,…

Neurons and Cognition · Quantitative Biology 2020-04-15 LR Mujica-Parodi , HH Strey

Graph reachability is the task of understanding whether two distinct points in a graph are interconnected by arcs to which in general a semantic is attached. Reachability has plenty of applications, ranging from motion planning to routing.…

Artificial Intelligence · Computer Science 2025-03-26 Davide Di Pierro , Stephan Mennicke , Stefano Ferilli

There have been rapid developments in model-based clustering of graphs, also known as block modelling, over the last ten years or so. We review different approaches and extensions proposed for different aspects in this area, such as the…

Machine Learning · Statistics 2020-01-01 Clement Lee , Darren J Wilkinson

The integration of knowledge extracted from different models described by domain experts or from models generated by machine learning algorithms is strongly conditioned by the lack of an appropriated framework to specify and integrate…

Logic in Computer Science · Computer Science 2016-04-12 Carlos Leandro

In fact, there exist three genres of intelligence architectures: logics (e.g. \textit{Random Forest, A$^*$ Searching}), neurons (e.g. \textit{CNN, LSTM}) and probabilities (e.g. \textit{Naive Bayes, HMM}), all of which are incompatible to…

Artificial Intelligence · Computer Science 2018-01-08 Han Xiao

A complete understanding of the brain requires an integrated description of the numerous scales of neural organization. It means studying the interplay of genes, synapses, and even whole brain regions which ultimately leads to different…

Neurons and Cognition · Quantitative Biology 2022-08-09 Charley Presigny , Fabrizio De Vico Fallani

We present a mathematical and philosophical framework in which brain function is modeled using sheaf theory over neural state spaces. Local neural or cognitive functions are represented as sections of a sheaf, while global coherence…

Neurons and Cognition · Quantitative Biology 2026-01-23 Takao Inoué

These lecture notes cover basic automata-theoretic concepts and logical formalisms for the modeling and verification of concurrent and distributed systems. Many of these concepts naturally extend the classical automata and logics over…

Logic in Computer Science · Computer Science 2021-10-19 Benedikt Bollig , Paul Gastin
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