Related papers: Temporal Phylogenetic Networks and Logic Programmi…
This paper introduces a dataset and conceptual framework for LLMs to mimic real world emotional dynamics through time and in-context learning leveraging physics-informed neural network, opening a possibility for interpretable dialogue…
Natural logic offers a powerful relational conception of meaning that is a natural counterpart to distributed semantic representations, which have proven valuable in a wide range of sophisticated language tasks. However, it remains an open…
This paper introduces a logic with a class of social network models that is based on standard Linear Temporal Logic (LTL), leveraging the power of existing model checkers for the analysis of social networks. We provide a short literature…
The power of any kind of network approach lies in the ability to simplify a complex system so that one can better understand its function as a whole. Sometimes it is beneficial, however, to include more information than in a simple graph of…
Ecological networks allow us to study the structure and function of ecosystems and gain insights on species resilience/stability. The study of this ecological networks is usually a snapshop focused in a limited specific range of space and…
Phylogenetic networks are a generalisation of phylogenetic trees that allow for more complex evolutionary histories that include hybridisation-like processes. It is of considerable interest whether a network can be considered `tree-like' or…
Typology is a subfield of linguistics that focuses on the study and classification of languages based on their structural features. Unlike genealogical classification, which examines the historical relationships between languages, typology…
Many formalisms combining ontology languages with uncertainty, usually in the form of probabilities, have been studied over the years. Most of these formalisms, however, assume that the probabilistic structure of the knowledge remains…
In historical linguistics, the affiliation of languages to a common language family is traditionally carried out using a complex workflow that relies on manually comparing individual languages. Large-scale standardized collections of…
The advantages of temporal networks in capturing complex dynamics, such as diffusion and contagion, has led to breakthroughs in real world systems across numerous fields. In the case of human behavior, face-to-face interaction networks…
In molecular phylogeny, relationships among organisms are reconstructed using DNA or protein sequences and are displayed as trees. A linear increase in the number of sequences results in an exponential increase of possible trees. Thus,…
While large language models (LLMs) have demonstrated remarkable reasoning capabilities, they are not without their flaws and inaccuracies. Recent studies have introduced various methods to mitigate these limitations. Temporal reasoning…
Recently, computational modelling became a very important research tool that enables us to study problems that for decades evaded scientific analysis. Evolutionary systems are certainly examples of such problems: they are composed of many…
Temporal networks of face-to-face interactions between individuals are useful proxies of the dynamics of social systems on fast time scales. Several empirical statistical properties of these networks have been shown to be robust across a…
The generation of comprehensible explanations is an essential feature of modern artificial intelligence systems. In this work, we consider probabilistic logic programming, an extension of logic programming which can be useful to model…
In this work, we answer an open problem in the study of phylogenetic networks. Phylogenetic trees are rooted binary trees in which all edges are directed away from the root, whereas phylogenetic networks are rooted acyclic digraphs. For the…
We present an elementary introduction to a new logic for reasoning about behaviors that occur over time. This logic is based on temporal type theory. The syntax of the logic is similar to the usual first-order logic; what differs is the…
Evolutionary Biologists have long struggled with the challenge of developing analysis workflows in a flexible manner, thus facilitating the reuse of phylogenetic knowledge. An evolutionary biology workflow can be viewed as a plan which…
"Natural Language," whether spoken and attended to by humans, or processed and generated by computers, requires networked structures that reflect creative processes in semantic, syntactic, phonetic, linguistic, social, emotional, and…
One of the defining features of living systems is their adaptability to changing environmental conditions. This requires organisms to extract temporal and spatial features of their environment, and use that information to compute the…