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To simulate plasma phenomena, large-scale computational resources have been employed in developing high-precision and high-resolution plasma simulations. One of the main obstacles in plasma simulations is the requirement of computational…

Quantum Physics · Physics 2025-11-17 Hayato Higuchi , Yuki Ito , Kazuki Sakamoto , Keisuke Fujii , Akimasa Yoshikawa

Despite broad interest in self-organizing systems, there are few quantitative, experimentally-applicable criteria for self-organization. The existing criteria all give counter-intuitive results for important cases. In this Letter, we…

Adaptation and Self-Organizing Systems · Physics 2011-11-10 Cosma Rohilla Shalizi , Kristina Lisa Shalizi , Robert Haslinger

In this work, we propose a new local optimization method to solve a class of nonconvex semidefinite programming (SDP) problems. The basic idea is to approximate the feasible set of the nonconvex SDP problem by inner positive semidefinite…

Optimization and Control · Mathematics 2012-02-27 Quoc Tran Dinh , Wim Michiels , Moritz Diehl

Background: Many biological systems are modeled qualitatively with discrete models, such as probabilistic Boolean networks, logical models, Petri nets, and agent-based models, with the goal to gain a better understanding of the system. The…

A nonautonomous dynamical system $(\boldsymbol{X},\boldsymbol{T})=\{(X_{k},T_{k})\}_{k=0}^{\infty}$ is a sequence of continuous mappings $T_{k}:X_{k} \to X_{k+1}$ along with a sequence of compact metric spaces $X_{k}$. In this paper, we…

Dynamical Systems · Mathematics 2025-11-18 Zhuo Chen , Jun Jie Miao

This article describes a method for constructing approximations to periodic solutions of dynamic Lorenz system with classical values of the system parameters. The author obtained a system of nonlinear algebraic equations in general form…

Numerical Analysis · Mathematics 2021-02-10 Alexander N. Pchelintsev

A dynamical system may be defined by a simple transition law - such as a map or a vector field. The objective of most learning techniques is to reconstruct this dynamic transition law. This is a major shortcoming, as most dynamic properties…

Dynamical Systems · Mathematics 2024-09-10 Suddhasattwa Das

This paper presents a randomized algorithm for computing the near-optimal low-rank dynamic mode decomposition (DMD). Randomized algorithms are emerging techniques to compute low-rank matrix approximations at a fraction of the cost of…

Numerical Analysis · Mathematics 2019-11-28 N. Benjamin Erichson , Lionel Mathelin , Steven L. Brunton , J. Nathan Kutz

In this paper we discuss three symbolic approaches for the generation of a finite difference scheme of a partial differential equation (PDE). We prove, that for a linear PDE with constant coefficients these three approaches are equivalent…

Mathematical Physics · Physics 2019-03-06 Viktor Levandovskyy , Bernd Martin

Bioprocess mechanistic modeling is essential for advancing intelligent digital twin representation of biomanufacturing, yet challenges persist due to complex intracellular regulation, stochastic system behavior, and limited experimental…

Machine Learning · Statistics 2025-05-07 Keilung Choy , Wei Xie , Keqi Wang

This paper presents a novel theoretical framework for reducing the computational complexity of multi-model adaptive control/estimation systems through systematic transformation to controllable canonical form. While traditional multi-model…

Systems and Control · Electrical Eng. & Systems 2025-04-30 Farid Mafi , Ladan Khoshnevisan , Mohammad Pirani , Amir Khajepour

We present a quantum algorithm based on repeated measurement to solve initial-value problems for nonlinear ordinary differential equations (ODEs), which may be generated from partial differential equations in plasma physics. We map a…

Quantum Physics · Physics 2025-04-30 Joseph Andress , Alexander Engel , Yuan Shi , Scott Parker

Biological systems fundamentally exist out of equilibrium in order to preserve organized structures and processes. Many changing cellular conditions can be represented as transitions between nonequilibrium steady states, and organisms have…

Statistical Mechanics · Physics 2014-08-08 Patrick R. Zulkowski , David A. Sivak , Michael R. DeWeese

The evolution of images with physics-based dynamics is often spatially localized and nonlinear. A switching linear dynamic system (SLDS) is a natural model under which to pose such problems when the system's evolution randomly switches over…

Systems and Control · Electrical Eng. & Systems 2021-02-23 Parisa Karimi , Mark Butala , Zhizhen Zhao , Farzad Kamalabadi

Realistic models of biological processes typically involve interacting components on multiple scales, driven by changing environment and inherent stochasticity. Such models are often analytically and numerically intractable. We revisit a…

Populations and Evolution · Quantitative Biology 2022-01-19 K. Bodova , E. Szep , N. H. Barton

In this paper, we develop a dynamical system counterpart to the term sparsity sum-of-squares (TSSOS) algorithm proposed for static polynomial optimization. This allows for computational savings and improved scalability while preserving…

Optimization and Control · Mathematics 2023-10-10 Jie Wang , Corbinian Schlosser , Milan Korda , Victor Magron

In this paper we consider the problem of finding an evolution of a dynamical system that originates and terminates in given sets of states. However, if such an evolution exists then it is usually not unique. We investigate this problem and…

Optimization and Control · Mathematics 2017-09-21 Jan Kuratko , Stefan Ratschan

Algorithms for the symbolic computation of polynomial conservation laws, generalized symmetries, and recursion operators for systems of nonlinear differential-difference equations (DDEs) are presented. The algorithms can be used to test the…

Mathematical Physics · Physics 2011-04-26 Ünal Göktaş , Willy Hereman

This paper presents the design of an extremum seeking controller based on sliding modes and cyclic search for real-time optimization of non-linear multivariable dynamic systems. These systems have arbitrary relative degree, compensated by…

Optimization and Control · Mathematics 2024-07-31 Nerito Oliveira Aminde , Tiago Roux Oliveira , Liu Hsu

Saddle points provide a hierarchical view of the energy landscape, revealing transition pathways and interconnected basins of attraction, and offering insight into the global structure, metastability, and possible collective mechanisms of…

Numerical Analysis · Mathematics 2025-10-17 Baoming Shi , Lei Zhang , Qiang Du
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