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Drug discovery and development is a complex and costly process. Machine learning approaches are being investigated to help improve the effectiveness and speed of multiple stages of the drug discovery pipeline. Of these, those that use…

Artificial Intelligence · Computer Science 2022-09-27 Stephen Bonner , Ian P Barrett , Cheng Ye , Rowan Swiers , Ola Engkvist , Andreas Bender , Charles Tapley Hoyt , William L Hamilton

It is an open secret that ImageNet is treated as the panacea of pretraining. Particularly in medical machine learning, models not trained from scratch are often finetuned based on ImageNet-pretrained models. We posit that pretraining on…

Computer Vision and Pattern Recognition · Computer Science 2025-02-17 Frederic Jonske , Moon Kim , Enrico Nasca , Janis Evers , Johannes Haubold , René Hosch , Felix Nensa , Michael Kamp , Constantin Seibold , Jan Egger , Jens Kleesiek

The generalization of deep neural networks to unknown domains is a major challenge despite their tremendous progress in recent years. For this reason, the dynamic area of domain generalization (DG) has emerged. In contrast to unsupervised…

Computer Vision and Pattern Recognition · Computer Science 2025-10-07 Manuel Schwonberg , Hanno Gottschalk

The increase in high-dimensional multiomics data demands advanced integration models to capture the complexity of human diseases. Graph-based deep learning integration models, despite their promise, struggle with small patient cohorts and…

Machine Learning · Computer Science 2024-08-07 Sina Tabakhi , Charlotte Vandermeulen , Ian Sudbery , Haiping Lu

Since its unveiling in 2011, schema.org has become the de facto standard for publishing semantically described structured data on the web, typically in the form of web page annotations. The increasing adoption of schema.org facilitates the…

Information Retrieval · Computer Science 2017-09-18 Umutcan Şimşek , Elias Kärle , Omar Holzknecht , Dieter Fensel

Communication network engineering in enterprise environments is traditionally a complex, time-consuming, and error-prone manual process. Most research on network engineering automation has concentrated on configuration synthesis, often…

Networking and Internet Architecture · Computer Science 2025-08-27 Beni Ifland , Elad Duani , Rubin Krief , Miro Ohana , Aviram Zilberman , Andres Murillo , Ofir Manor , Ortal Lavi , Hikichi Kenji , Asaf Shabtai , Yuval Elovici , Rami Puzis

Multi-domain recommender systems benefit from cross-domain representation learning and positive knowledge transfer. Both can be achieved by introducing a specific modeling of input data (i.e. disjoint history) or trying dedicated training…

Information Retrieval · Computer Science 2023-02-23 Alejandro Ariza-Casabona , Bartlomiej Twardowski , Tri Kurniawan Wijaya

The appeal of metric evaluation of research impact has attracted considerable interest in recent times. Although the public at large and administrative bodies are much interested in the idea, scientists and other researchers are much more…

Digital Libraries · Computer Science 2018-04-10 Fionn Murtagh , Michael Orlov , Boris Mirkin

Sexism in online media comments is a pervasive challenge that often manifests subtly, complicating moderation efforts as interpretations of what constitutes sexism can vary among individuals. We study monolingual and multilingual…

Computation and Language · Computer Science 2024-10-03 Florian Bremm , Patrick Gustav Blaneck , Tobias Bornheim , Niklas Grieger , Stephan Bialonski

Background: Biological networks have a growing importance for the interpretation of high-throughput omics data. Integrative network analysis makes use of statistical and combinatorial methods to extract smaller subnetwork modules, and…

Computational Engineering, Finance, and Science · Computer Science 2014-07-23 Kasper Dinkla , Mohammed El-Kebir , Cristina-Iulia Bucur , Marco Siderius , Martine J. Smit , Michel A. Westenberg , Gunnar W. Klau

We study the statistical properties of large random networks with specified degree distributions. New techniques are presented for analyzing the structure of social networks. Specifically, we address the question of how many nodes exist at…

Physics and Society · Physics 2007-05-23 Erik Volz

This paper provides a global picture about the deployment of networked processing services for genomic data sets. Many current research make an extensive use genomic data, which are massive and rapidly increasing over time. They are…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-09-27 Gianluca Reali , Mauro Femminella , Emilia Nunzi , Dario Valocchi

Scholars often explore literature outside of their home community of study. This exploration process is frequently hampered by field-specific jargon. Past computational work often focuses on supporting translation work by removing jargon…

Computation and Language · Computer Science 2025-03-25 Calvin Bao , Yow-Ting Shiue , Marine Carpuat , Joel Chan

We introduce a new lexical resource that enriches the Framester knowledge graph, which links Framnet, WordNet, VerbNet and other resources, with semantic features from text corpora. These features are extracted from distributionally induced…

Computation and Language · Computer Science 2018-03-16 Stefano Faralli , Alexander Panchenko , Chris Biemann , Simone Paolo Ponzetto

A good deal of current research in complex networks involves the characterization and/or classification of the topological properties of given structures, which has motivated several respective measurements. This letter proposes a framework…

Physics and Society · Physics 2016-07-26 Cesar H. Comin , Filipi N. Silva , Luciano da F. Costa

Open Domain Question Answering (QA) is evolving from complex pipelined systems to end-to-end deep neural networks. Specialized neural models have been developed for extracting answers from either text alone or Knowledge Bases (KBs) alone.…

Computation and Language · Computer Science 2018-09-05 Haitian Sun , Bhuwan Dhingra , Manzil Zaheer , Kathryn Mazaitis , Ruslan Salakhutdinov , William W. Cohen

Today's database is associated with interoperability between different domains and applications. This consequently results in the importance of data portability in database. XML format fits the requirements and it has been increasingly used…

Databases · Computer Science 2010-10-07 Mikael Fernandus Simalango

Exploring the darknet can be a daunting task; this paper explores the application of data mining the darknet within a Canadian cybercrime perspective. Measuring activity through marketplace analysis and vendor attribution has proven…

Cryptography and Security · Computer Science 2021-05-31 Edward Crowder , Jay Lansiquot

How can researchers test for heterogeneity in the local structure of a network? In this paper, we present a framework that utilizes random sampling to give subgraphs which are then used in a goodness of fit test to test for heterogeneity.…

Methodology · Statistics 2015-12-04 Jonathan Tuke , Matthew Roughan

SNOMED Clinical Terms (SNOMED CT) is one of the most widespread ontologies in the life sciences, with more than 300,000 concepts and relationships, but is distributed with no associated software tools. In this paper we present MySNOM, a…

Artificial Intelligence · Computer Science 2010-12-09 Pablo Lopez-Garcia