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Monitoring the distribution of microfossils in stratigraphic successions is an essential tool for biostratigraphic, evolutionary and paleoecologic/paleoceanographic studies. To estimate the relative abundance (%) of a given species, it is…

Quantitative Methods · Quantitative Biology 2018-05-14 Ali T. Haidar , Abbas Al-Hakim , Zhiyi Zhang

Insects comprise millions of species, many experiencing severe population declines under environmental and habitat changes. High-throughput approaches are crucial for accelerating our understanding of insect diversity, with DNA barcoding…

Neural networks have proven effective at solving difficult problems but designing their architectures can be challenging, even for image classification problems alone. Our goal is to minimize human participation, so we employ evolutionary…

Neural and Evolutionary Computing · Computer Science 2017-06-13 Esteban Real , Sherry Moore , Andrew Selle , Saurabh Saxena , Yutaka Leon Suematsu , Jie Tan , Quoc Le , Alex Kurakin

A fundamental algorithmic problem in computational biology is to find all subgraphs of a given type (superbubbles, snarls, and ultrabubbles) in a directed or bidirected input graph. These correspond to regions of genetic variation and are…

Domain-specific image collections present potential value in various areas of science and business but are often not curated nor have any way to readily extract relevant content. To employ contemporary supervised image analysis methods on…

Machine Learning · Computer Science 2020-03-10 Sara Mousavi , Dylan Lee , Tatianna Griffin , Dawnie Steadman , Audris Mockus

Large-scale multi-layer networks with large numbers of nodes, edges, and layers arise across various domains, which poses a great computational challenge for the downstream analysis. In this paper, we develop an efficient randomized…

Computation · Statistics 2025-01-10 Wenqing Su , Xiao Guo , Xiangyu Chang , Ying Yang

Tracking the abundance of underwater species is crucial for understanding the effects of climate change on marine ecosystems. Biologists typically monitor underwater sites with echosounders and visualize data as 2D images (echograms); they…

Ground beetles are a highly sensitive and speciose biological indicator, making them vital for monitoring biodiversity. However, they are currently an underutilized resource due to the manual effort required by taxonomic experts to perform…

Computer Vision and Pattern Recognition · Computer Science 2026-01-27 S M Rayeed , Alyson East , Samuel Stevens , Sydne Record , Charles V Stewart

Wildlife re-identification aims to match individuals of the same species across different observations. Current state-of-the-art (SOTA) models rely on class labels to train supervised models for individual classification. This dependence on…

Computer Vision and Pattern Recognition · Computer Science 2025-07-04 Mufhumudzi Muthivhi , Terence L. van Zyl

As is true of many complex tasks, the work of discovering, describing, and understanding the diversity of life on Earth (viz., biological systematics and taxonomy) requires many tools. Some of this work can be accomplished as it has been…

Machine Learning · Statistics 2023-11-16 Li Xu , Yili Hong , Eric P. Smith , David S. McLeod , Xinwei Deng , Laura J. Freeman

Recognising relevant objects or object states in its environment is a basic capability for an autonomous robot. The dominant approach to object recognition in images and range images is classification by supervised machine learning,…

Computer Vision and Pattern Recognition · Computer Science 2019-03-19 Mikhail Usvyatsov , Konrad Schindler

Identifying individual animals in long-duration videos is essential for behavioral ecology, wildlife monitoring, and livestock management. Traditional methods require extensive manual annotation, while existing self-supervised approaches…

Computer Vision and Pattern Recognition · Computer Science 2026-01-15 Xuyang Fang , Sion Hannuna , Edwin Simpson , Neill Campbell

Several methods to identify plants have been proposed by several researchers. Commonly, the methods did not capture color information, because color was not recognized as an important aspect to the identification. In this research, shape…

Computer Vision and Pattern Recognition · Computer Science 2014-01-20 Abdul Kadir , Lukito Edi Nugroho , Adhi Susanto , Paulus Insap Santosa

We investigate a class of continuum models for the motion of a two-dimensional biological group under the influence of nonlocal social interactions. The dynamics may be uniquely decomposed into incompressible motion and potential motion.…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 C. M. Topaz , A. L. Bertozzi

In this paper we present a novel approach for automatic recognition of ring worm skin disease based on LBP (Local Binary Pattern) feature extracted from the affected skin images. The proposed method is evaluated by extensive experiments on…

Computer Vision and Pattern Recognition · Computer Science 2011-04-05 Srimanta Kundu , Nibaran Das , Mita Nasipuri

Supervised classification is the most active and emerging research trends in today's scenario. In this view, Artificial Neural Network (ANN) techniques have been widely employed and growing interest to the researchers day by day. ANN…

Machine Learning · Computer Science 2019-05-16 Arijit Nandi , Nanda Dulal Jana

This Paper represents a literature review of Swarm intelligence algorithm in the area of semi-supervised classification. There are many research papers for applying swarm intelligence algorithms in the area of machine learning. Some…

Machine Learning · Computer Science 2017-06-06 Shahira Shaaban Azab , Hesham Ahmed Hefny

Drawing inspiration from honeybee swarms' nest-site selection process, we assess the ability of a kilobot robot swarm to replicate this captivating example of collective decision-making. Honeybees locate the optimal site for their new nest…

Disordered Systems and Neural Networks · Physics 2024-09-04 David March , Julia Múgica , Ezequiel E. Ferrero , M. Carmen Miguel

We explore a simplified class of models we call swarms, which are inspired by the collective behavior of social insects. We perform a mean-field stability analysis and perform numerical simulations of the model. Several interesting types of…

adap-org · Physics 2009-10-28 Erik M. Rauch , Mark M. Millonas , Dante R. Chialvo

Agriculture is a key sector of the economies of developing countries. It serves as a primary source of income and employment for rural populations. However, each year, a large portion of crops is wasted because of pests and diseases.…

Computer Vision and Pattern Recognition · Computer Science 2026-05-05 Muhammad Kaleem Ullah Khan