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The longest common subsequence (LCS) is a fundamental problem in string processing which has numerous algorithmic studies, extensions, and applications. A sequence $u_1, \ldots, u_f$ of $f$ strings s said to be an ($f$-)segmentation of a…
We introduce the Random Subsequence Model, a spin glass model on pairs of random strings $(X,Y) \in \{0,1\}^N \times \{0,1\}^M$ whose partition function counts subsequence embeddings of $Y$ into $X$. We study two variants: the null model,…
We present an $m^{4/3+o(1)}\log W$-time algorithm for solving the minimum cost flow problem in graphs with unit capacity, where $W$ is the maximum absolute value of any edge weight. For sparse graphs, this improves over the best known…
This paper considers the problem of maintaining statistic aggregates over the last W elements of a data stream. First, the problem of counting the number of 1's in the last W bits of a binary stream is considered. A lower bound of…
Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In the \emph{deterministic} variant the goal is to solve the string…
Given a sequence of integers, we want to find a longest increasing subsequence of the sequence. It is known that this problem can be solved in $O(n \log n)$ time and space. Our goal in this paper is to reduce the space consumption while…
Minimizers are sampling schemes with numerous applications in computational biology. Assuming a fixed alphabet of size $\sigma$, a minimizer is defined by two integers $k,w\ge2$ and a linear order $\rho$ on strings of length $k$ (also…
We consider compact representations of collections of similar strings that support random access queries. The collection of strings is given by a rooted tree where edges are labeled by an edit operation (inserting, deleting, or replacing a…
Two recent lower bounds on the compressibility of repetitive sequences, $\delta \le \gamma$, have received much attention. It has been shown that a length-$n$ string $S$ over an alphabet of size $\sigma$ can be represented within the…
We revisit the range $\tau$-majority problem, which asks us to preprocess an array $A[1..n]$ for a fixed value of $\tau \in (0,1/2]$, such that for any query range $[i,j]$ we can return a position in $A$ of each distinct $\tau$-majority…
We observe message-efficient distributed algorithms for the Set Cover problem. Given a ground set $U$ of $n$ elements and $m$ subsets of $U$, we aim to find the minimal number of these subsets that contain all elements. In the default…
We present a data structure representing a dynamic set S of w-bit integers on a w-bit word RAM. With |S|=n and w > log n and space O(n), we support the following standard operations in O(log n / log w) time: - insert(x) sets S = S + {x}. -…
We develop a randomized approximation algorithm for the classical maximum coverage problem, which given a list of sets $A_1,A_2,\cdots, A_m$ and integer parameter $k$, select $k$ sets $A_{i_1}, A_{i_2},\cdots, A_{i_k}$ for maximum union…
Maximum bipartite matching (MBM) is a fundamental problem in combinatorial optimization with a long and rich history. A classic result of Hopcroft and Karp (1973) provides an $O(m \sqrt{n})$-time algorithm for the problem, where $n$ and $m$…
A fundamental problem arising in many applications in Web science and social network analysis is, given an arbitrary approximation factor $c>1$, to output a set $S$ of nodes that with high probability contains all nodes of PageRank at least…
In the Bin Packing problem one is given $n$ items with weights $w_1,\ldots,w_n$ and $m$ bins with capacities $c_1,\ldots,c_m$. The goal is to find a partition of the items into sets $S_1,\ldots,S_m$ such that $w(S_j) \leq c_j$ for every bin…
We introduce a novel multivariate approach for solving weighted parameterized problems. In our model, given an instance of size $n$ of a minimization (maximization) problem, and a parameter $W \geq 1$, we seek a solution of weight at most…
We study the influence of a graph parameter called modular-width on the time complexity for optimally solving well-known polynomial problems such as Maximum Matching, Triangle Counting, and Maximum $s$-$t$ Vertex-Capacitated Flow. The…
In the classical longest palindromic substring (LPS) problem, we are given a string $S$ of length $n$, and the task is to output a longest palindromic substring in $S$. Gilbert, Hajiaghayi, Saleh, and Seddighin [SPAA 2023] showed how to…
We study the problem of partitioning integer sequences in the one-pass data streaming model. Given is an input stream of integers $X \in \{0, 1, \dots, m \}^n$ of length $n$ with maximum element $m$, and a parameter $p$. The goal is to…