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The kinetics of the self-assembly of nanocomponents into a virus, nanocapsule, or other composite structure is analyzed via a multiscale approach. The objective is to achieve predictability and to preserve key atomic-scale features that…

Chemical Physics · Physics 2015-05-18 Stephen Pankavich , Zeina Shreif , Yinglong Miao , Peter Ortoleva

Many proposals have already been made for realizing programmable matter, ranging from shape-changing molecules, DNA tiles, and synthetic cells to reconfigurable modular robotics. Envisioning systems of nano-sensors devices, we are…

Emerging Technologies · Computer Science 2015-04-09 Zahra Derakhshandeh , Robert Gmyr , Andrea W. Richa , Christian Scheideler , Thim Strothmann

The vacuum (i.e., the ground state) of a system in ultrastrong light-matter coupling contains particles that cannot be emitted without any dynamical perturbation and is thus called virtual. We propose a protocol for inducing and observing…

Soft materials (e.g., enveloped viruses, liposomes, membranes and supercooled liquids) simultaneously deform or display collective behaviors, while undergoing atomic scale vibrations and collisions. While the multiple space-time character…

Soft Condensed Matter · Physics 2014-01-03 Peter Ortoleva , Abhishek Singharoy , Stephen Pankavich

We describe a two-dimensional model for active particles whose self-propulsion speed is not fixed, but varies in time, and whose motion is subject to both translational and rotational diffusion. In the conventional treatment of active…

Soft Condensed Matter · Physics 2025-10-01 Tayeb Jamali

In recent years significant attention has been attracted to proposals which utilize DNA for nanotechnological applications. Potential applications of these ideas range from the programmable self-assembly of colloidal crystals, to biosensors…

Soft Condensed Matter · Physics 2008-05-02 Nicholas A. Licata

Patterns generated by a colloidal suspension of nanospheres drying on a frictional substrate are studied by experiments and computer simulations. The obtained two-dimensional self-assembled structures are commonly used for nanosphere…

Soft Condensed Matter · Physics 2009-11-11 F. Jarai-Szabo , S. Astilean , Z. Neda

Prions are misfolded proteins that transmit their structural arrangement to neighboring proteins. In biological systems, prion dynamics can produce a variety of complex functional outcomes. Yet, an understanding of prionic causes has been…

Soft Condensed Matter · Physics 2025-01-14 Mathieu Ouellet , Dani S. Bassett , Lee C. Bassett , Kieran A. Murphy , Shubhankar P. Patankar

Particle systems are physical systems of simple computational particles that can bond to neighboring particles and use these bonds to move from one spot to another (non-occupied) spot. These particle systems are supposed to be able to…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-07-17 Shlomi Dolev , Robert Gmyr , Andrea W. Richa , Christian Scheideler

More and more materials, with a growing variety of properties, are built into electronic devices. This is motivated both by increased device performance and by the studies of materials themselves. An important type of device is a Josephson…

We propose dynamical collapse models in which the stochastic collapse terms affect only photons and/or gravitons. In principle, isolated systems comprising only massive particles could evolve unitarily indefinitely in such models. In…

Quantum Physics · Physics 2026-02-27 Adrian Kent

Inspired by protein folding, we explored the construction of three-dimensional structures and machines from one-dimensional chains of simple building blocks. This approach not only allows us to recreate the self-replication mechanism…

Computation and Language · Computer Science 2024-08-15 Ralph P. Lano

We investigate computational issues in the distributed model Amoebots of programmable matter. In this model, the computational entities, called particles, are anonymous finite-state machines that operate and move on an hexagonal tasselation…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-01 Giuseppe Antonio Di Luna , Paola Flocchini , Nicola Santoro , Giovanni Viglietta , Yukiko Yamauchi

As toy models for space-time on the Planck scale, we consider examples of fermion systems in discrete space-time which are composed of one or two particles defined on two up to nine space-time points. We study the self-organization of the…

Mathematical Physics · Physics 2014-11-18 Alexander Diethert , Felix Finster , Daniela Schiefeneder

We study the behaviour of interacting self-propelled particles, whose self-propulsion speed decreases with their local density. By combining direct simulations of the microscopic model with an analysis of the hydrodynamic equations obtained…

Statistical Mechanics · Physics 2012-06-25 F. D. C. Farrell , J. Tailleur , D. Marenduzzo , M. C. Marchetti

Self-assembly is a phenomenon observed in nature at all scales where autonomous entities build complex structures, without external influences nor centralised master plan. Modelling such entities and programming correct interactions among…

Computational Complexity · Computer Science 2013-09-26 German Terrazas , Hector Zenil , Natalio Krasnogor

Recent advances in the field of active soft matter promise a lot. Both, experimental advances and theoretical understanding point towards new material classes in reach, for example self-healing materials that might switch their properties…

Biological Physics · Physics 2026-04-17 Jannis Fischer , Alejandro Jurado , Timo Betz

Solving intractable mathematical problems in simulators composed of atoms, ions, photons or electrons has recently emerged as a subject of intense interest. Here we extend this concept to phonons that are localised in spectrally pure…

Mesoscale and Nanoscale Physics · Physics 2016-06-29 I. Mahboob , H. Yamaguchi

Active matter comprises self-driven units, such as bacteria and synthetic microswimmers, that can spontaneously form complex patterns and assemble into functional microdevices. These processes are possible thanks to the out-of-equilibrium…

Soft Condensed Matter · Physics 2021-11-17 Jens Grauer , Falko Schmidt , Jesus Pineda , Benjamin Midtvedt , Hartmut Löwen , Giovanni Volpe , Benno Liebchen

In systems possessing spatial or dynamical symmetry breaking, Brownian motion combined with symmetric external input signals, deterministic or random, alike, can assist directed motion of particles at the submicron scales. In such cases,…

Statistical Mechanics · Physics 2009-06-05 Peter Hanggi , Fabio Marchesoni