Related papers: PHORMA: Perfectly Hashed Order Restricted Multidim…
Let $H$ be a fixed graph on $v$ vertices. For an $n$-vertex graph $G$ with $n$ divisible by $v$, an $H$-{\em factor} of $G$ is a collection of $n/v$ copies of $H$ whose vertex sets partition $V(G)$. In this paper we consider the threshold…
The construction of perfect hash functions is a well-studied topic. In this paper, this concept is generalized with the following definition. We say that a family of functions from $[n]$ to $[k]$ is a $\delta$-balanced $(n,k)$-family of…
Feature hashing, also known as {\em the hashing trick}, introduced by Weinberger et al. (2009), is one of the key techniques used in scaling-up machine learning algorithms. Loosely speaking, feature hashing uses a random sparse projection…
A novel code construction algorithm is presented to find all the possible code families for code reconfiguration in an OCDMA system. The algorithm is developed through searching all the complete subgraphs of a constructed graph. The…
Given a pattern string $P$ of length $n$ and a query string $T$ of length $m$, where the characters of $P$ and $T$ are drawn from an alphabet of size $\Delta$, the {\em exact string matching} problem consists of finding all occurrences of…
Given a set S of n keys, a k-perfect hash function (kPHF) is a data structure that maps the keys to the first m integers, where each output integer can be hit by at most k input keys. When m=n/k, the resulting function is called a minimal…
In the Fully Leafed Induced Subtrees, one is given a graph $G$ and two integers $a$ and $b$ and the question is to find an induced subtree of $G$ with $a$ vertices and at least $b$ leaves. This problem is known to be NP-complete even when…
Representing a proof tree by a combinator term that reduces to the tree lets subtle forms of duplication within the tree materialize as duplicated subterms of the combinator term. In a DAG representation of the combinator term these…
A PSCA$(v, t, \lambda)$ is a multiset of permutations of the $v$-element alphabet $\{0, \dots, v-1\}$ such that every sequence of $t$ distinct elements of the alphabet appears in the specified order in exactly $\lambda$ permutations. For $v…
This note presents an analytic construction of the optimal unit-norm direction hat(x) = x/|x| that maximizes or minimizes the objective linear expression, B . hat(x), subject to a system of linear constraints of the form [A] . x = 0, where…
We explore a data structure that generalises rectangular multi-dimensional arrays. The shape of an n-dimensional array is typically given by a tuple of n natural numbers. Each element in that tuple defines the length of the corresponding…
A deterministic BSP algorithm for constructing the suffix array of a given string is presented, based on a technique which we call accelerated sampling. It runs in optimal O(n/p) local computation and communication, and requires a near…
We present an efficient algorithm to compute permanents, mixed discriminants and hyperdeterminants of structured matrices and multidimensional arrays (tensors). We describe the sparsity structure of an array in terms of a graph, and we…
An aggregative composition is a binary operation obeying the principle that the whole is determined by the sum of its parts. The development of graph algebras, on which the theory of formal graph languages is built, relies on aggregative…
A recent paradigm shift in bioinformatics from a single reference genome to a pangenome brought with it several graph structures. These graph structures must implement operations, such as efficient construction from multiple genomes and…
A Heffter array $H(m,n;s,t)$ is an $m \times n$ matrix with nonzero entries from $\mathbb{Z}_{2ms+1}$ such that $i)$ each row contains $s$ filled cells and each column contains $t$ filled cells, $ii)$ every row and column sum to 0, and…
Exact pattern matching in labeled graphs is the problem of searching paths of a graph $G=(V,E)$ that spell the same string as the given pattern $P[1..m]$. This basic problem can be found at the heart of more complex operations on variation…
This paper presents several algorithms for hashing directed graphs. The algorithms given are capable of hashing entire graphs as well as assigning hash values to specific nodes in a given graph. The notion of node symmetry is made precise…
An \emph{indeterminate string} $x = x[1..n]$ on an alphabet $\Sigma$ is a sequence of nonempty subsets of $\Sigma$; $x$ is said to be \emph{regular} if every subset is of size one. A proper substring $u$ of regular $x$ is said to be a…
In this paper we compute the bivariate generating function of $\gamma$-matchings over two backbones, filtered by the number of arcs and the topological genus. $\gamma$-matchings over two backbones are chord-diagrams, obtained via…