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GPU-enhanced architectures are now dominant in HPC systems, but message-passing communication involving GPUs with MPI has proven to be both complex and expensive, motivating new approaches that lower such costs. We compare and contrast…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-01 Patrick G. Bridges , Anthony Skjellum , Evan D. Suggs , Derek Schafer , Purushotham V. Bangalore

Scale-out parallel processing based on MPI is a 25-year-old standard with at least another decade of preceding history of enabling technologies in the High Performance Computing community. Newer frameworks such as MapReduce, Hadoop, and…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-07-18 Brandon L. Morris , Anthony Skjellum

In the exascale computing era, optimizing MPI collective performance in high-performance computing (HPC) applications is critical. Current algorithms face performance degradation due to system call overhead, page faults, or data-copy…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-19 Jiajun Huang , Kaiming Ouyang , Yujia Zhai , Jinyang Liu , Min Si , Ken Raffenetti , Hui Zhou , Atsushi Hori , Zizhong Chen , Yanfei Guo , Rajeev Thakur

For several years, MPI has been the de facto standard for writing parallel applications. One of the most popular MPI implementations is MPICH. Its successor, MPICH2, features a completely new design that provides more performance and…

Hardware Architecture · Computer Science 2007-05-23 Jiuxing Liu , Weihang Jiang , Pete Wyckoff , Dhabaleswar K. Panda , David Ashton , Darius Buntinas , William Gropp , Brian Toonen

Distributed memory programming is the established paradigm used in high-performance computing (HPC) systems, requiring explicit communication between nodes and devices. When FPGAs are deployed in distributed settings, communication is…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-07 Tiziano De Matteis , Johannes de Fine Licht , Jakub Beránek , Torsten Hoefler

Dask is a popular parallel and distributed computing framework, which rivals Apache Spark to enable task-based scalable processing of big data. The Dask Distributed library forms the basis of this computing engine and provides support for…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-25 Aamir Shafi , Jahanzeb Maqbool Hashmi , Hari Subramoni , Dhabaleswar K. Panda

MPI+Threads, embodied by the MPI/OpenMP hybrid programming model, is a parallel programming paradigm where threads are used for on-node shared-memory parallelization and MPI is used for multi-node distributed-memory parallelization. OpenMP…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-31 Hui Zhou , Ken Raffenetti , Junchao Zhang , Yanfei Guo , Rajeev Thakur

This work presents an extension to MPI supporting the one-sided communication model and window allocations in storage. Our design transparently integrates with the current MPI implementations, enabling applications to target MPI windows in…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-28 Sergio Rivas-Gomez , Stefano Markidis , Ivy Bo Peng , Erwin Laure , Gokcen Kestor , Roberto Gioiosa

The current trend of multicore architectures on shared memory systems underscores the need of parallelism. While there are some programming model to express parallelism, thread programming model has become a standard to support these system…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-12-13 D. T. Hasta , A. B. Mutiara

Most end devices are now equipped with multiple network interfaces. Applications can exploit all available interfaces and benefit from multipath transmission. Recently Multipath TCP (MPTCP) was proposed to implement multipath transmission…

Networking and Internet Architecture · Computer Science 2017-09-19 Liyang Sun , Guibin Tian , Guanyu Zhu , Yong Liu , Hang Shi , David Dai

MPI derived datatypes are an abstraction that simplifies handling of non-contiguous data in MPI applications. These datatypes are recursively constructed at runtime from primitive Named Types defined in the MPI standard. More recently, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-22 Carl Pearson , Kun Wu , I-Hsin Chung , Jinjun Xiong , Wen-Mei Hwu

Message logging protocols are enablers of local rollback, a more efficient alternative to global rollback, for fault tolerant MPI applications. Until now, message logging MPI implementations have incurred the overheads of a redesign and…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-09 Kiril Dichev , Dimitrios S. Nikolopoulos

The use of hybrid scheme combining the message passing programming models for inter-node parallelism and the shared memory programming models for node-level parallelism is widely spread. Existing extensive practices on hybrid Message…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-23 Huan Zhou , Jose Gracia , Naweiluo Zhou , Ralf Schneider

Message Passing Interface (MPI) is widely used to implement parallel programs. Although Windowsbased architectures provide the facilities of parallel execution and multi-threading, little attention has been focused on using MPI on these…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-05-31 Alaa Ismail Elnashar

We present a simple and easy to apply methodology for using high-level self-submitting parallel job queues in an MPI environment. Using C++, we implemented a library of functions, MPQueue, both for testing our concepts and for use in real…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-04-23 John M. Neuberger , Nandor Sieben , James W. Swift

MPI is the most widely used interface for high-performance computing (HPC) workloads. Its success lies in its embrace of libraries and ability to evolve while maintaining backward compatibility for older codes, enabling them to run on new…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-08-23 Jeff R. Hammond , Lisandro Dalcin , Erik Schnetter , Marc Pérache , Jean-Baptiste Besnard , Jed Brown , Gonzalo Brito Gadeschi , Joseph Schuchart , Simon Byrne , Hui Zhou

This system paper documents the technical foundations for the extension of the Topology ToolKit (TTK) to distributed-memory parallelism with the Message Passing Interface (MPI). While several recent papers introduced topology-based…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-16 Eve Le Guillou , Michael Will , Pierre Guillou , Jonas Lukasczyk , Pierre Fortin , Christoph Garth , Julien Tierny

pPython seeks to provide a parallel capability that provides good speed-up without sacrificing the ease of programming in Python by implementing partitioned global array semantics (PGAS) on top of a simple file-based messaging library…

We present a lightweight Python framework for distributed training of neural networks on multiple GPUs or CPUs. The framework is built on the popular Keras machine learning library. The Message Passing Interface (MPI) protocol is used to…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-12-19 Dustin Anderson , Jean-Roch Vlimant , Maria Spiropulu

Recent increased interest in Cloud computing emphasizes the need to find an adequate solution to the load-balancing problem in parallel computing -- efficiently running several jobs concurrently on a cluster of shared computers (nodes). One…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-07-02 Adam Lev-Libfeld , Alex Margolin , Amnon Barak